Information for 5-TTTAAAWAGT (Motif 5)

A C G T A C G T A G C T G T C A C T G A C G T A C G T A C G T A C A T G C G A T
Reverse Opposite:
C G T A G T A C A C G T C G A T A C G T A G C T A C G T T C G A G T C A C G T A
p-value:1e-5
log p-value:-1.178e+01
Information Content per bp:1.799
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif17.39%
Number of Background Sequences with motif990.6
Percentage of Background Sequences with motif2.23%
Average Position of motif in Targets456.9 +/- 275.6bp
Average Position of motif in Background460.3 +/- 379.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--TTTAAAWAGT
NATTCAAAT---
 A C G T A C G T A C G T A C G T A G C T G T C A C T G A C G T A C G T A C G T A C A T G C G A T
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----TTTAAAWAGT
CGGTTTCAAA----
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T G T C A C T G A C G T A C G T A C G T A C A T G C G A T
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TTTAAAWAGT
CCAAAAATAG-
 A C G T A C G T A C G T A G C T G T C A C T G A C G T A C G T A C G T A C A T G C G A T
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTTAAAWAGT
ACTATAAATAGA
 A C G T A C G T A C G T A C G T A G C T G T C A C T G A C G T A C G T A C G T A C A T G C G A T
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

MEF2B/MA0660.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTTAAAWAGT
GCTATAAATAGC
 A C G T A C G T A C G T A C G T A G C T G T C A C T G A C G T A C G T A C G T A C A T G C G A T
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTTAAAWAGT
DCYAAAAATAGM
 A C G T A C G T A C G T A C G T A G C T G T C A C T G A C G T A C G T A C G T A C A T G C G A T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

MEF2A/MA0052.4/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TTTAAAWAGT--
TTCTAAAAATAGAAA
 A C G T A C G T A C G T A C G T A C G T A G C T G T C A C T G A C G T A C G T A C G T A C A T G C G A T A C G T A C G T
C G A T C A G T G A T C G A C T C G T A C G T A C G T A C G T A C G T A G C A T C T G A C T A G G T C A G C T A G C T A

Arid5a/MA0602.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTTAAAWAGT--
NNTNNCAATATTAG
 A C G T A C G T A C G T A C G T A G C T G T C A C T G A C G T A C G T A C G T A C A T G C G A T A C G T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTTAAAWAGT--
NNTNNCAATATTAG
 A C G T A C G T A C G T A C G T A G C T G T C A C T G A C G T A C G T A C G T A C A T G C G A T A C G T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTTAAAWAGT
KCCAAAAATAGC
 A C G T A C G T A C G T A C G T A G C T G T C A C T G A C G T A C G T A C G T A C A T G C G A T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C