Information for 4-AGCTCMTGAG (Motif 4)

G C T A C T A G A T G C A G C T T A G C G T A C A C G T A C T G G T C A C T A G
Reverse Opposite:
A G T C A C G T A G T C G T C A C A T G A T C G T C G A A T C G G A T C C G A T
p-value:1e-5
log p-value:-1.180e+01
Information Content per bp:1.757
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif23.91%
Number of Background Sequences with motif2095.5
Percentage of Background Sequences with motif4.71%
Average Position of motif in Targets601.2 +/- 249.1bp
Average Position of motif in Background556.5 +/- 318.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OSR2/MA1646.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGCTCMTGAG-
NNGCTTCTGTNN
 A C G T G C T A C T A G A T G C A G C T T A G C G T A C A C G T A C T G G T C A C T A G A C G T
A G T C C A G T T C A G G A T C A G C T G C A T A T G C G A C T A T C G A C G T C A G T C A G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGCTCMTGAG
-GCTCCG---
 G C T A C T A G A T G C A G C T T A G C G T A C A C G T A C T G G T C A C T A G
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGCTCMTGAG
NGCTN-----
 G C T A C T A G A T G C A G C T T A G C G T A C A C G T A C T G G T C A C T A G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------AGCTCMTGAG
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T A G A T G C A G C T T A G C G T A C A C G T A C T G G T C A C T A G
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AGCTCMTGAG-----
----CTTGAGTGGCT
 G C T A C T A G A T G C A G C T T A G C G T A C A C G T A C T G G T C A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

OSR1/MA1542.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGCTCMTGAG
TGCTACTGTT
 G C T A C T A G A T G C A G C T T A G C G T A C A C G T A C T G G T C A C T A G
G A C T T C A G A G T C G A C T G C T A G T A C A G C T C T A G A G C T C A G T

ZBTB26/MA1579.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGCTCMTGAG-----
TACTCCAGAAAAGAT
 G C T A C T A G A T G C A G C T T A G C G T A C A C G T A C T G G T C A C T A G A C G T A C G T A C G T A C G T A C G T
C A G T C G T A G A T C C G A T T G A C A G T C C T G A C T A G G T C A T C G A T G C A T G C A T C A G G T C A G A C T

Zic2/MA1629.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGCTCMTGAG--
CCCCCTGCTGTGNN
 A C G T A C G T G C T A C T A G A T G C A G C T T A G C G T A C A C G T A C T G G T C A C T A G A C G T A C G T
A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGCTCMTGAG-----
-GGGCCTGAGGCGGG
 G C T A C T A G A T G C A G C T T A G C G T A C A C G T A C T G G T C A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C T G C A T G A T C G T A G C A T G C A G C T T A C G T G C A T A C G T A C G T A G C A T C G T C A G A T C G

PH0151.1_Pou6f1_1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGCTCMTGAG-----
GACGATAATGAGCTTGC
 A C G T A C G T G C T A C T A G A T G C A G C T T A G C G T A C A C G T A C T G G T C A C T A G A C G T A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C