Information for 1-GCTCAGAGCA (Motif 1)

A C T G G T A C A C G T A T G C C G T A T C A G C G T A A C T G A G T C C G T A
Reverse Opposite:
A C G T T C A G A G T C C G A T A G T C G A C T A T C G G T C A A C T G A G T C
p-value:1e-9
log p-value:-2.106e+01
Information Content per bp:1.841
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif23.91%
Number of Background Sequences with motif826.3
Percentage of Background Sequences with motif1.86%
Average Position of motif in Targets487.1 +/- 251.2bp
Average Position of motif in Background564.3 +/- 275.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCTCAGAGCA-
GCCGCGCAGTGCGT
 A C G T A C G T A C G T A C T G G T A C A C G T A T G C C G T A T C A G C G T A A C T G A G T C C G T A A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

TCF7/MA0769.2/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCTCAGAGCA
ANATCAAAGNN
 A C G T A C T G G T A C A C G T A T G C C G T A T C A G C G T A A C T G A G T C C G T A
C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCTCAGAGCA---
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T A C G T A C T G G T A C A C G T A T G C C G T A T C A G C G T A A C T G A G T C C G T A A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCTCAGAGCA
NGCTN------
 A C G T A C T G G T A C A C G T A T G C C G T A T C A G C G T A A C T G A G T C C G T A
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCTCAGAGCA---
NANAGATCAAAGGGNNN
 A C G T A C G T A C G T A C G T A C T G G T A C A C G T A T G C C G T A T C A G C G T A A C T G A G T C C G T A A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

Zic2/MA1629.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCTCAGAGCA-----
-CTCACAGCAGGGGG
 A C T G G T A C A C G T A T G C C G T A T C A G C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T G A C C A G T T G A C G C T A T A G C G T C A T A C G A G T C C T G A C A T G A T C G C T A G T C A G T C A G

PB0083.1_Tcf7_1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GCTCAGAGCA---
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A C T G G T A C A C G T A T G C C G T A T C A G C G T A A C T G A G T C C G T A A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCTCAGAGCA
GCTCCG----
 A C T G G T A C A C G T A T G C C G T A T C A G C G T A A C T G A G T C C G T A
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GCTCAGAGCA---
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A C T G G T A C A C G T A T G C C G T A T C A G C G T A A C T G A G T C C G T A A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCTCAGAGCA-----
CCACACAGCAGGAGA
 A C T G G T A C A C G T A T G C C G T A T C A G C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A