Information for 6-GCATGCYCMG (Motif 5)

T C A G A T G C G T C A A C G T A T C G G A T C G A C T T A G C T G C A T C A G
Reverse Opposite:
A G T C A C G T A T C G C T G A C T A G T A G C T G C A C A G T T A C G A G T C
p-value:1e-4
log p-value:-1.097e+01
Information Content per bp:1.519
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif13.04%
Number of Background Sequences with motif529.7
Percentage of Background Sequences with motif1.18%
Average Position of motif in Targets748.2 +/- 189.4bp
Average Position of motif in Background591.3 +/- 293.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCATGCYCMG---
TCNCCTGCTGNGNNN
 A C G T A C G T T C A G A T G C G T C A A C G T A T C G G A T C G A C T T A G C T G C A T C A G A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCATGCYCMG
GCGCATGCGCAG
 A C G T A C G T T C A G A T G C G T C A A C G T A T C G G A T C G A C T T A G C T G C A T C A G
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCATGCYCMG-
-CCTGCTGAGH
 T C A G A T G C G T C A A C G T A T C G G A T C G A C T T A G C T G C A T C A G A C G T
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GCATGCYCMG-
--ATGCCCACC
 T C A G A T G C G T C A A C G T A T C G G A T C G A C T T A G C T G C A T C A G A C G T
A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

NRF(NRF)/Promoter/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GCATGCYCMG
GCGCATGCGCAC
 A C G T A C G T T C A G A T G C G T C A A C G T A T C G G A T C G A C T T A G C T G C A T C A G
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCATGCYCMG---
TNTCCTGCTGTGNNG
 A C G T A C G T T C A G A T G C G T C A A C G T A T C G G A T C G A C T T A G C T G C A T C A G A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCATGCYCMG
NNCCTGCTGNG
 A C G T T C A G A T G C G T C A A C G T A T C G G A T C G A C T T A G C T G C A T C A G
A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCATGCYCMG---
NNTCCTGCTGTGNNN
 A C G T A C G T T C A G A T G C G T C A A C G T A T C G G A T C G A C T T A G C T G C A T C A G A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCATGCYCMG----
ACATGCCCGGGCAT
 T C A G A T G C G T C A A C G T A T C G G A T C G A C T T A G C T G C A T C A G A C G T A C G T A C G T A C G T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

NRF1/MA0506.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCATGCYCMG
GCGCCTGCGCA-
 A C G T A C G T T C A G A T G C G T C A A C G T A T C G G A T C G A C T T A G C T G C A T C A G
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T