Information for 5-CATCAKCAKC (Motif 5)

G T A C G T C A A C G T A G T C C G T A A C T G A G T C C T G A A C T G A G T C
Reverse Opposite:
A C T G G T A C A G C T A C T G G T A C A C G T A C T G G T C A A C G T A C T G
p-value:1e-3
log p-value:-7.668e+00
Information Content per bp:1.833
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif21.28%
Number of Background Sequences with motif2764.3
Percentage of Background Sequences with motif6.11%
Average Position of motif in Targets630.6 +/- 286.1bp
Average Position of motif in Background566.3 +/- 313.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CATCAKCAKC-
ADGGYAGYAGCATCT
 A C G T A C G T A C G T A C G T G T A C G T C A A C G T A G T C C G T A A C T G A G T C C T G A A C T G A G T C A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CATCAKCAKC-----
CTCAGCAGCTGCTACTG
 A C G T A C G T G T A C G T C A A C G T A G T C C G T A A C T G A G T C C T G A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CATCAKCAKC
ATTGCATCAT----
 A C G T A C G T A C G T A C G T G T A C G T C A A C G T A G T C C G T A A C T G A G T C C T G A A C T G A G T C
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CATCAKCAKC-
-AGCAGCTGCT
 G T A C G T C A A C G T A G T C C G T A A C T G A G T C C T G A A C T G A G T C A C G T
A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CATCAKCAKC
ATTGCATCAK----
 A C G T A C G T A C G T A C G T G T A C G T C A A C G T A G T C C G T A A C T G A G T C C T G A A C T G A G T C
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T A C G T A C G T

JUN/MA0488.1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CATCAKCAKC
ATGACATCATCNN-
 A C G T A C G T A C G T A C G T G T A C G T C A A C G T A G T C C G T A A C T G A G T C C T G A A C T G A G T C
T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CATCAKCAKC
-ANCAGCTG-
 G T A C G T C A A C G T A G T C C G T A A C T G A G T C C T G A A C T G A G T C
A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T

POL002.1_INR/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CATCAKCAKC
--TCAGTCTT
 G T A C G T C A A C G T A G T C C G T A A C T G A G T C C T G A A C T G A G T C
A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

ATF4/MA0833.2/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------CATCAKCAKC
NNATTGCATCATNN--
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C G T C A A C G T A G T C C G T A A C T G A G T C C T G A A C T G A G T C
C G A T C A G T T C G A G C A T C A G T C T A G G A T C T C G A G A C T G T A C C G T A A G C T G A C T G A C T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CATCAKCAKC-
NNAGCAGCTGCT
 A C G T G T A C G T C A A C G T A G T C C G T A A C T G A G T C C T G A A C T G A G T C A C G T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T