Information for 2-CTCACACTCA (Motif 2)

A G T C A C G T A G T C C G T A A G T C C G T A A G T C G A C T A G T C T C G A
Reverse Opposite:
A G C T A C T G C T G A C T A G A C G T A C T G C G A T A C T G T G C A A C T G
p-value:1e-8
log p-value:-1.936e+01
Information Content per bp:1.849
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif23.40%
Number of Background Sequences with motif974.2
Percentage of Background Sequences with motif2.14%
Average Position of motif in Targets479.4 +/- 303.5bp
Average Position of motif in Background491.2 +/- 281.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CTCACACTCA-
MCTCCCMCRCAB
 A C G T A G T C A C G T A G T C C G T A A G T C C G T A A G T C G A C T A G T C T C G A A C G T
G T A C G A T C C A G T A G T C A G T C A G T C T G C A G A T C C T G A A T G C G T C A A C G T

MSANTD3/MA1523.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CTCACACTCA-
-GTACACTCAC
 A G T C A C G T A G T C C G T A A G T C C G T A A G T C G A C T A G T C T C G A A C G T
A C G T A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----CTCACACTCA-
AGCGGCACACACGCAA
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C C G T A A G T C G A C T A G T C T C G A A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTCACACTCA
CRCCCACGCA
 A G T C A C G T A G T C C G T A A G T C C G T A A G T C G A C T A G T C T C G A
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

PBX3/MA1114.1/Jaspar

Match Rank:5
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----CTCACACTCA---
NNNCCTGTCACTCANNN
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C C G T A A G T C G A C T A G T C T C G A A C G T A C G T A C G T
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C

MGA/MA0801.1/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CTCACACTCA
-TCACACCT-
 A G T C A C G T A G T C C G T A A G T C C G T A A G T C G A C T A G T C T C G A
A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T

NKX2-5/MA0063.2/Jaspar

Match Rank:7
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CTCACACTCA---
--ACCACTCAAAA
 A G T C A C G T A G T C C G T A A G T C C G T A A G T C G A C T A G T C T C G A A C G T A C G T A C G T
A C G T A C G T T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A

PKNOX1/MA0782.2/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CTCACACTCA--
NNGCTGTCACTCANN
 A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C C G T A A G T C G A C T A G T C T C G A A C G T A C G T
G A C T T C G A A T C G T G A C G C A T C T A G G A C T T A G C G C T A T G A C G A C T A G T C G C T A C G T A G C T A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:9
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTCACACTCA
GSCTGTCACTCA
 A C G T A C G T A G T C A C G T A G T C C G T A A G T C C G T A A G T C G A C T A G T C T C G A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

TBX1/MA0805.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTCACACTCA
-TCACACCT-
 A G T C A C G T A G T C C G T A A G T C C G T A A G T C G A C T A G T C T C G A
A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T