Information for 9-CTTAAACATC (Motif 9)

A G T C A C G T A C G T C T G A C G T A G T C A A G T C C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A C G A T A C T G A C G T A C G T A G C T C G T A C G T A C T A G
p-value:1e-5
log p-value:-1.231e+01
Information Content per bp:1.861
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif26.53%
Number of Background Sequences with motif2686.2
Percentage of Background Sequences with motif6.00%
Average Position of motif in Targets473.4 +/- 236.0bp
Average Position of motif in Background479.6 +/- 334.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR6A1/MA1541.1/Jaspar

Match Rank:1
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----CTTAAACATC--
NTGACCTTGAACTTGAN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T C T G A C G T A G T C A A G T C C G T A A C G T A G T C A C G T A C G T
G C A T G A C T T C A G T G C A G T A C G T A C C A G T G C A T T C A G T C G A G T C A G T A C A C G T G A C T T A C G T C G A T G A C

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTTAAACATC
TGACCTTGACCT--
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T C T G A C G T A G T C A A G T C C G T A A C G T A G T C
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T

FOXD1/MA0031.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTTAAACATC
-GTAAACAT-
 A G T C A C G T A C G T C T G A C G T A G T C A A G T C C G T A A C G T A G T C
A C G T A C T G A C G T G T C A C G T A T C G A G A T C C G T A C G A T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTTAAACATC
-GTAAACAA-
 A G T C A C G T A C G T C T G A C G T A G T C A A G T C C G T A A C G T A G T C
A C G T C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A A C G T

FOXA1/MA0148.4/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTTAAACATC-
ATGTAAACATGT
 A C G T A G T C A C G T A C G T C T G A C G T A G T C A A G T C C G T A A C G T A G T C A C G T
C G T A C G A T C T A G G A C T T G C A G T C A C G T A G A T C G C T A C G A T C A T G C G A T

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTTAAACATC-
-TTGAMCTTTG
 A G T C A C G T A C G T C T G A C G T A G T C A A G T C C G T A A C G T A G T C A C G T
A C G T A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTTAAACATC------
-TTAACCCTTTVNKKN
 A G T C A C G T A C G T C T G A C G T A G T C A A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G A C T C G T A G C T A G T A C G A T C G T A C G A C T A G C T A C G T T G A C C G T A C A G T A C G T A T G C

NR2F2/MA1111.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTTAAACATC-
NNTGACCTTTN
 A G T C A C G T A C G T C T G A C G T A G T C A A G T C C G T A A C G T A G T C A C G T
G A C T G A C T G A C T C T A G T G C A G A T C G T A C G A C T G C A T C A G T C T A G

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTTAAACATC-
-ATGACCTTGA
 A G T C A C G T A C G T C T G A C G T A G T C A A G T C C G T A A C G T A G T C A C G T
A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

FOXO3/MA0157.2/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTTAAACATC
-GTAAACAA-
 A G T C A C G T A C G T C T G A C G T A G T C A A G T C C G T A A C G T A G T C
A C G T C T A G A C G T T G C A G T C A G T C A G T A C G T C A C G T A A C G T