Information for 6-CCCTTTCAGA (Motif 6)

G T A C A G T C A G T C A C G T A C G T A C G T G T A C G C T A A T C G T G C A
Reverse Opposite:
A C G T A T G C C G A T A C T G T G C A C G T A C G T A C T A G A C T G C A T G
p-value:1e-7
log p-value:-1.675e+01
Information Content per bp:1.748
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif42.86%
Number of Background Sequences with motif5326.7
Percentage of Background Sequences with motif11.89%
Average Position of motif in Targets474.4 +/- 264.5bp
Average Position of motif in Background544.6 +/- 320.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CCCTTTCAGA
NNGCACCTTTCTCC
 A C G T A C G T A C G T A C G T G T A C A G T C A G T C A C G T A C G T A C G T G T A C G C T A A T C G T G C A
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

NR4A1/MA1112.2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CCCTTTCAGA
NNTGACCTTTNN--
 A C G T A C G T A C G T A C G T G T A C A G T C A G T C A C G T A C G T A C G T G T A C G C T A A T C G T G C A
G A C T A G C T G A C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T C G T A G T C A A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCCTTTCAGA
TGACCTTTNCNT
 A C G T A C G T G T A C A G T C A G T C A C G T A C G T A C G T G T A C G C T A A T C G T G C A
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CCCTTTCAGA-
-CCTTTGATST
 G T A C A G T C A G T C A C G T A C G T A C G T G T A C G C T A A T C G T G C A A C G T
A C G T A T G C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------CCCTTTCAGA
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A G T C A G T C A C G T A C G T A C G T G T A C G C T A A T C G T G C A
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

TATA-Box(TBP)/Promoter/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCCTTTCAGA---
-CCTTTTATAGNC
 G T A C A G T C A G T C A C G T A C G T A C G T G T A C G C T A A T C G T G C A A C G T A C G T A C G T
A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCCTTTCAGA
GTGACCTTGRVN-
 A C G T A C G T A C G T G T A C A G T C A G T C A C G T A C G T A C G T G T A C G C T A A T C G T G C A
C A T G G A C T T A C G G T C A G T A C G A T C G A C T A G C T A T C G T C G A T A C G T A G C A C G T

HLTF/MA0109.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCCTTTCAGA
AACCTTATAT--
 A C G T A C G T G T A C A G T C A G T C A C G T A C G T A C G T G T A C G C T A A T C G T G C A
C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------CCCTTTCAGA
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A G T C A G T C A C G T A C G T A C G T G T A C G C T A A T C G T G C A
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCCTTTCAGA--
VCCTCTCTGDDY
 G T A C A G T C A G T C A C G T A C G T A C G T G T A C G C T A A T C G T G C A A C G T A C G T
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C