Information for 5-AATGGTAGTA (Motif 5)

C G T A C G T A G C A T A C T G T A C G C A G T C T G A C A T G G A C T T C G A
Reverse Opposite:
A G C T C T G A G T A C G A C T G T C A A T G C T G A C C G T A C G A T C G A T
p-value:1e-7
log p-value:-1.731e+01
Information Content per bp:1.690
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif28.57%
Number of Background Sequences with motif2068.3
Percentage of Background Sequences with motif4.62%
Average Position of motif in Targets393.6 +/- 222.0bp
Average Position of motif in Background470.9 +/- 315.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1/MA1608.1/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AATGGTAGTA
NNCTAATGGNN---
 A C G T A C G T A C G T A C G T C G T A C G T A G C A T A C T G T A C G C A G T C T G A C A T G G A C T T C G A
A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T A C G T A C G T A C G T

SOX2/MA0143.4/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AATGGTAGTA
AAACAATGGAA---
 A C G T A C G T A C G T A C G T C G T A C G T A G C A T A C T G T A C G C A G T C T G A C A T G G A C T T C G A
C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A A C G T A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AATGGTAGTA
GGGAATTGTAGT-
 A C G T A C G T A C G T C G T A C G T A G C A T A C T G T A C G C A G T C T G A C A T G G A C T T C G A
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:4
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------AATGGTAGTA
NNTNNACAATGGGANNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C A T A C T G T A C G C A G T C T G A C A T G G A C T T C G A
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

SOX21/MA0866.1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AATGGTAGTA--
AACAATGGTAGTGTT
 A C G T A C G T A C G T C G T A C G T A G C A T A C T G T A C G C A G T C T G A C A T G G A C T T C G A A C G T A C G T
C T G A T C G A A T G C T C G A T C G A C A G T C A T G C A T G G A C T T C G A C A T G C G A T C T A G C A G T A G C T

NKX6-3/MA1530.1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AATGGTAGTA
TTTAATGAN----
 A C G T A C G T A C G T C G T A C G T A G C A T A C T G T A C G C A G T C T G A C A T G G A C T T C G A
C G A T C G A T A G C T C T G A C G T A A C G T T C A G C T G A A T C G A C G T A C G T A C G T A C G T

BARX2/MA1471.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AATGGTAGTA
NTAATGGTTTTN
 A C G T A C G T C G T A C G T A G C A T A C T G T A C G C A G T C T G A C A T G G A C T T C G A
A T C G G C A T C T G A G T C A A G C T A C T G C T A G A C G T G C A T C G A T G C A T G A C T

SOX13/MA1120.1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AATGGTAGTA
AAACAATGGCA---
 A C G T A C G T A C G T A C G T C G T A C G T A G C A T A C T G T A C G C A G T C T G A C A T G G A C T T C G A
C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A A C G T A C G T A C G T

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AATGGTAGTA
NTAATBNAATTA
 A C G T A C G T C G T A C G T A G C A T A C T G T A C G C A G T C T G A C A T G G A C T T C G A
G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AATGGTAGTA
GKTAATGR-----
 A C G T A C G T A C G T C G T A C G T A G C A T A C T G T A C G C A G T C T G A C A T G G A C T T C G A
A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T