Information for 2-TCCCAAGTYC (Motif 2)

C G A T A T G C A G T C A G T C C G T A T C G A A T C G A G C T A G C T A G T C
Reverse Opposite:
T C A G T C G A C T G A T A G C A G C T C G A T C T A G C T A G A T C G G C T A
p-value:1e-8
log p-value:-1.851e+01
Information Content per bp:1.725
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif36.73%
Number of Background Sequences with motif3418.0
Percentage of Background Sequences with motif7.63%
Average Position of motif in Targets546.2 +/- 289.0bp
Average Position of motif in Background530.6 +/- 343.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBPJ/MA1116.1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TCCCAAGTYC
NNTTCCCANN---
 A C G T A C G T A C G T C G A T A T G C A G T C A G T C C G T A T C G A A T C G A G C T A G C T A G T C
A T G C A C G T C A G T G C A T T G A C T G A C A G T C C T G A A T C G T C A G A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TCCCAAGTYC
HTTTCCCASG---
 A C G T A C G T A C G T C G A T A T G C A G T C A G T C C G T A T C G A A T C G A G C T A G C T A G T C
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T

NFIC/MA0161.2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TCCCAAGTYC
NNTGCCAAGNN-
 A C G T A C G T C G A T A T G C A G T C A G T C C G T A T C G A A T C G A G C T A G C T A G T C
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A A C G T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCCCAAGTYC
GGTGCCAAGT--
 A C G T A C G T C G A T A T G C A G T C A G T C C G T A T C G A A T C G A G C T A G C T A G T C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

HNF4G/MA0484.2/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TCCCAAGTYC---
TCCAAAGTCCAGA
 C G A T A T G C A G T C A G T C C G T A T C G A A T C G A G C T A G C T A G T C A C G T A C G T A C G T
C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A

HNF4A/MA0114.4/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TCCCAAGTYC---
TCCAAAGTCCAAA
 C G A T A T G C A G T C A G T C C G T A T C G A A T C G A G C T A G C T A G T C A C G T A C G T A C G T
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCCCAAGTYC
CGTGCCAAG---
 A C G T A C G T C G A T A T G C A G T C A G T C C G T A T C G A A T C G A G C T A G C T A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

ZNF75D/MA1601.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCCCAAGTYC
TTTCCCACAN--
 A C G T A C G T C G A T A T G C A G T C A G T C C G T A T C G A A T C G A G C T A G C T A G T C
G A C T A G C T C A G T T A G C G T A C A G T C C T G A A G T C G T C A A G C T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCCCAAGTYC----
GAGCCCTTGTCCCTAA
 A C G T A C G T C G A T A T G C A G T C A G T C C G T A T C G A A T C G A G C T A G C T A G T C A C G T A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCCCAAGTYC
ATGCCAACC--
 A C G T C G A T A T G C A G T C A G T C C G T A T C G A A T C G A G C T A G C T A G T C
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T