Information for 4-AGCT (Motif 13)

C G T A A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A C G T
p-value:1e0
log p-value:-1.515e+00
Information Content per bp:1.530
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif95.92%
Number of Background Sequences with motif41089.0
Percentage of Background Sequences with motif91.75%
Average Position of motif in Targets467.7 +/- 284.0bp
Average Position of motif in Background530.0 +/- 320.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)4.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:AGCT-
NGCTN
 C G T A A C T G A G T C A C G T A C G T
T A C G A C T G A G T C A C G T A T C G

BHLHE22(var.2)/MA1635.1/Jaspar

Match Rank:2
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---AGCT---
CGCAGCTGCG
 A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A T G C T A C G A G T C T C G A A T C G T A G C A G C T T A C G A T G C T A C G

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--AGCT-
CAAGCTT
 A C G T A C G T C G T A A C T G A G T C A C G T A C G T
G A T C C G T A C G T A A T C G A G T C A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:4
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--AGCT----
HCAGCTGDTN
 A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

MYOG/MA0500.2/Jaspar

Match Rank:5
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----AGCT----
NNGCAGCTGCNN
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
T A G C C T G A T C A G A G T C T C G A A C T G T G A C A G C T T C A G A G T C G A C T A T C G

Ptf1a(var.2)/MA1619.1/Jaspar

Match Rank:6
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----AGCT----
NNACAGCTGTNN
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
T C A G T G A C T C G A G T A C T C G A A T C G T A G C A G C T A C T G A G C T A C T G A G T C

MYF5/MA1641.1/Jaspar

Match Rank:7
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----AGCT----
GAACAGCTGTTC
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
T A C G T C G A T C G A T A G C C G T A A T C G T A G C G C A T A T C G A G C T A G C T A T G C

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:8
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---AGCT-
AACAGCTG
 A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C G T
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----AGCT--
CAGCAGCTGN
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:10
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----AGCT--
NAACAGCTGG
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G