Information for 10-GCKGGSGCCG (Motif 10)

A T C G G T A C A C T G A C T G C T A G A T G C A T C G T G A C T A G C C T A G
Reverse Opposite:
A G T C A T C G A C T G A T G C T A C G A G T C G T A C T G A C A C T G T A G C
p-value:1e-5
log p-value:-1.166e+01
Information Content per bp:1.793
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif30.61%
Number of Background Sequences with motif3812.1
Percentage of Background Sequences with motif8.51%
Average Position of motif in Targets609.2 +/- 271.9bp
Average Position of motif in Background671.4 +/- 345.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0010.1_Egr1_1/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---GCKGGSGCCG-
ANTGCGGGGGCGGN
 A C G T A C G T A C G T A T C G G T A C A C T G A C T G C T A G A T G C A T C G T G A C T A G C C T A G A C G T
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A

Plagl1/MA1615.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCKGGSGCCG--
CCCTGGGGCCAGG
 A C G T A T C G G T A C A C T G A C T G C T A G A T G C A T C G T G A C T A G C C T A G A C G T A C G T
T A G C T A G C T A G C G C A T T A C G T C A G T A C G T A C G G T A C A T G C T C G A A T C G T A C G

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCKGGSGCCG----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A T C G G T A C A C T G A C T G C T A G A T G C A T C G T G A C T A G C C T A G A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCKGGSGCCG----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A T C G G T A C A C T G A C T G C T A G A T G C A T C G T G A C T A G C C T A G A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

CTCFL/MA1102.2/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCKGGSGCCG-
AGCAGGGGGCGC
 A C G T A T C G G T A C A C T G A C T G C T A G A T G C A T C G T G A C T A G C C T A G A C G T
T C G A T A C G A T G C T G C A A T C G T C A G A T C G A T C G C A T G G A T C T C A G A T G C

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCKGGSGCCG
NNGCAGGTGNN-
 A C G T A C G T A T C G G T A C A C T G A C T G C T A G A T G C A T C G T G A C T A G C C T A G
T A G C T C A G T C A G A G T C T C G A A T C G T A C G A G C T T C A G A T G C A T C G A C G T

TCF4/MA0830.2/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCKGGSGCCG
NNGGCAGGTGCNN
 A C G T A C G T A C G T A T C G G T A C A C T G A C T G C T A G A T G C A T C G T G A C T A G C C T A G
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G A G C T A T C G A T G C G T A C T A C G

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCKGGSGCCG
NNGGCAGGTGCNN
 A C G T A C G T A C G T A T C G G T A C A C T G A C T G C T A G A T G C A T C G T G A C T A G C C T A G
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G G A C T T A C G A T G C G C A T T A C G

EGR3/MA0732.1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCKGGSGCCG--
ANTGCGTGGGCGTNN
 A C G T A C G T A C G T A T C G G T A C A C T G A C T G C T A G A T G C A T C G T G A C T A G C C T A G A C G T A C G T
C G T A C T A G G A C T C T A G A G T C T A C G A C G T T C A G C T A G A T C G G A T C C T A G C A G T C T G A C T A G

TCF3/MA0522.3/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCKGGSGCCG
NNGCAGGTGNN-
 A C G T A C G T A T C G G T A C A C T G A C T G C T A G A T G C A T C G T G A C T A G C C T A G
T A C G A T C G T C A G A G T C T C G A A T C G T A C G A G C T T A C G A T G C A T C G A C G T