Information for 8-TTTWTTATGA (Motif 7)

A G C T C G A T A G C T C G A T A C G T A C G T C T G A A C G T A C T G G T C A
Reverse Opposite:
C A G T A G T C G T C A A G C T C G T A G T C A C G T A T C G A C G T A T C G A
p-value:1e-6
log p-value:-1.523e+01
Information Content per bp:1.779
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif1058.1
Percentage of Background Sequences with motif2.36%
Average Position of motif in Targets447.1 +/- 268.1bp
Average Position of motif in Background458.3 +/- 344.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC10/MA0905.1/Jaspar

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:TTTWTTATGA-
-NTTTTACGAC
 A G C T C G A T A G C T C G A T A C G T A C G T C T G A A C G T A C T G G T C A A C G T
A C G T C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C

PB0176.1_Sox5_2/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---TTTWTTATGA--
NNCTNAATTATGANN
 A C G T A C G T A C G T A G C T C G A T A G C T C G A T A C G T A C G T C T G A A C G T A C T G G T C A A C G T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

HOXD11/MA0908.1/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TTTWTTATGA-
-NTTTTACGAC
 A G C T C G A T A G C T C G A T A C G T A C G T C T G A A C G T A C T G G T C A A C G T
A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----TTTWTTATGA--
GNATTTTTTTTTTGANC
 A C G T A C G T A C G T A C G T A C G T A G C T C G A T A G C T C G A T A C G T A C G T C T G A A C G T A C T G G T C A A C G T A C G T
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

HOXD12/MA0873.1/Jaspar

Match Rank:5
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TTTWTTATGA--
-NTTTTACGACT
 A G C T C G A T A G C T C G A T A C G T A C G T C T G A A C G T A C T G G T C A A C G T A C G T
A C G T C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

HOXB9/MA1503.1/Jaspar

Match Rank:6
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TTTWTTATGA-
-NTTTTACGAC
 A G C T C G A T A G C T C G A T A C G T A C G T C T G A A C G T A C T G G T C A A C G T
A C G T C T G A C G A T C A G T A C G T C G A T G T C A A G T C A C T G C T G A A G T C

HOXD10/MA1506.1/Jaspar

Match Rank:7
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TTTWTTATGA--
-NTTTTACGACC
 A G C T C G A T A G C T C G A T A C G T A C G T C T G A A C G T A C T G G T C A A C G T A C G T
A C G T C T A G C G A T C A G T A C G T G C A T G T C A A G T C A C T G T C G A A G T C A G T C

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:8
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TTTWTTATGA-
-NTTTTATGAC
 A G C T C G A T A G C T C G A T A C G T A C G T C T G A A C G T A C T G G T C A A C G T
A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

HOXC9/MA0485.2/Jaspar

Match Rank:9
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TTTWTTATGA-
-NTTTTACGAC
 A G C T C G A T A G C T C G A T A C G T A C G T C T G A A C G T A C T G G T C A A C G T
A C G T C T G A C G A T A C G T A C G T C G A T G T C A A G T C A C T G C T G A A G T C

PH0068.1_Hoxc13/Jaspar

Match Rank:10
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTTWTTATGA-----
NAATTTTACGAGNTNN
 A C G T A G C T C G A T A G C T C G A T A C G T A C G T C T G A A C G T A C T G G T C A A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T