Information for 12-AAGAGAAAGT (Motif 11)

C G T A T G C A C T A G C T G A A T C G C G T A C G T A C G T A A C T G A C G T
Reverse Opposite:
G T C A G T A C A C G T A C G T A C G T A T G C A G C T A G T C A C G T A C G T
p-value:1e-3
log p-value:-8.706e+00
Information Content per bp:1.804
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif22.00%
Number of Background Sequences with motif2709.3
Percentage of Background Sequences with motif6.05%
Average Position of motif in Targets497.3 +/- 268.1bp
Average Position of motif in Background479.7 +/- 331.5bp
Strand Bias (log2 ratio + to - strand density)-2.6
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.3/Jaspar

Match Rank:1
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:AAGAGAAAGT-
NAGAGAAAGNA
 C G T A T G C A C T A G C T G A A T C G C G T A C G T A C G T A A C T G A C G T A C G T
C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--AAGAGAAAGT
GAAAGTGAAAGT
 A C G T A C G T C G T A T G C A C T A G C T G A A T C G C G T A C G T A C G T A A C T G A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:AAGAGAAAGT
AAAACAAAGG
 C G T A T G C A C T A G C T G A A T C G C G T A C G T A C G T A A C T G A C G T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--AAGAGAAAGT
GAAAGTGAAAGT
 A C G T A C G T C G T A T G C A C T A G C T G A A T C G C G T A C G T A C G T A A C T G A C G T
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:5
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AAGAGAAAGT
ACVAGGAAGT
 C G T A T G C A C T A G C T G A A T C G C G T A C G T A C G T A A C T G A C G T
G C T A A G T C T A C G T G C A A T C G T C A G G C T A T C G A T C A G A G C T

SOX10/MA0442.2/Jaspar

Match Rank:6
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AAGAGAAAGT-
AAAACAAAGAA
 C G T A T G C A C T A G C T G A A T C G C G T A C G T A C G T A A C T G A C G T A C G T
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AAGAGAAAGT
ANCAGGAAGT
 C G T A T G C A C T A G C T G A A T C G C G T A C G T A C G T A A C T G A C G T
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T

Stat2/MA1623.1/Jaspar

Match Rank:8
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AAGAGAAAGT
AGAAACAGAAACT
 A C G T A C G T A C G T C G T A T G C A C T A G C T G A A T C G C G T A C G T A C G T A A C T G A C G T
C T G A C T A G C T G A G C T A T C G A T A G C G C T A C T A G T C G A C T G A T C G A T A G C G C A T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:9
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AAGAGAAAGT
GRAASTGAAAST
 A C G T A C G T C G T A T G C A C T A G C T G A A T C G C G T A C G T A C G T A A C T G A C G T
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:10
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AAGAGAAAGT
AGAAACGAAAGT
 A C G T A C G T C G T A T G C A C T A G C T G A A T C G C G T A C G T A C G T A A C T G A C G T
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T