Information for 11-TTAAGTGGGT (Motif 10)

A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A G T C C G T A A G T C A C G T A C G T C G T A C G T A
p-value:1e-4
log p-value:-9.581e+00
Information Content per bp:1.530
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif18.00%
Number of Background Sequences with motif1616.1
Percentage of Background Sequences with motif3.61%
Average Position of motif in Targets378.2 +/- 281.5bp
Average Position of motif in Background469.0 +/- 331.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:1
Score:0.88
Offset:-4
Orientation:reverse strand
Alignment:----TTAAGTGGGT---
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

PH0115.1_Nkx2-6/Jaspar

Match Rank:2
Score:0.86
Offset:-4
Orientation:reverse strand
Alignment:----TTAAGTGGGT--
AATNTTAAGTGGNTNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G A C T G A C G T A C G T A C G T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

PH0004.1_Nkx3-2/Jaspar

Match Rank:3
Score:0.85
Offset:-4
Orientation:reverse strand
Alignment:----TTAAGTGGGT---
NTNNTTAAGTGGTTANN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

Nkx3-2/MA0122.3/Jaspar

Match Rank:4
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-TTAAGTGGGT--
NTTAAGTGGTTNN
 A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G A C T G A C G T A C G T A C G T
C G A T G C A T C G A T C T G A C G T A C A T G C G A T C T A G A C T G G C A T G C A T G C T A G C A T

Nkx3-1/MA0124.2/Jaspar

Match Rank:5
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:TTAAGTGGGT
TTAAGTGGT-
 A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G A C T G A C G T
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:6
Score:0.81
Offset:-4
Orientation:reverse strand
Alignment:----TTAAGTGGGT--
AAATTCAAGTGGNTTN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G A C T G A C G T A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-TTAAGTGGGT
NTCAAGTGGN-
 A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G A C T G A C G T
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:8
Score:0.78
Offset:-4
Orientation:reverse strand
Alignment:----TTAAGTGGGT--
AATTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G A C T G A C G T A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

PH0171.1_Nkx2-1/Jaspar

Match Rank:9
Score:0.78
Offset:-4
Orientation:reverse strand
Alignment:----TTAAGTGGGT--
AANTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G A C T G A C G T A C G T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

ISL2/MA0914.1/Jaspar

Match Rank:10
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:TTAAGTGGGT
TTAAGTGC--
 A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G A C T G A C G T
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T