Information for 4-GCGCAAACCC (Motif 4)

A T C G G T A C A C T G T A G C C T G A G T C A G T C A A T G C G T A C A G T C
Reverse Opposite:
A C T G A C T G T A C G A C G T A C G T A G C T A T C G G T A C A C T G A T G C
p-value:1e-7
log p-value:-1.657e+01
Information Content per bp:1.833
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif22.45%
Number of Background Sequences with motif1217.9
Percentage of Background Sequences with motif2.69%
Average Position of motif in Targets501.9 +/- 273.1bp
Average Position of motif in Background616.2 +/- 302.6bp
Strand Bias (log2 ratio + to - strand density)-1.9
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCGCAAACCC
TGCGCAGGCGC
 A C G T A T C G G T A C A C T G T A G C C T G A G T C A G T C A A T G C G T A C A G T C
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCGCAAACCC--
GGACACACCCCC
 A T C G G T A C A C T G T A G C C T G A G T C A G T C A A T G C G T A C A G T C A C G T A C G T
T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCGCAAACCC
GGCGGGAAAH-
 A C G T A T C G G T A C A C T G T A G C C T G A G T C A G T C A A T G C G T A C A G T C
T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCGCAAACCC-
GGGGGAATCCCC
 A C G T A T C G G T A C A C T G T A G C C T G A G T C A G T C A A T G C G T A C A G T C A C G T
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

E2F2/MA0864.2/Jaspar

Match Rank:5
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GCGCAAACCC
NNAATGGCGCCAAAAC
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T A C A C T G T A G C C T G A G T C A G T C A A T G C G T A C A G T C
T C A G C G T A G C T A C G T A C A G T A T C G A T C G G A T C A C T G A T G C A T G C G C T A G C T A G C T A G C T A A G T C

Spz1/MA0111.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCGCAAACCC-
GCTGTTACCCT
 A T C G G T A C A C T G T A G C C T G A G T C A G T C A A T G C G T A C A G T C A C G T
A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCGCAAACCC-
GCCGCGCAGTGCGT
 A C G T A C G T A C G T A T C G G T A C A C T G T A G C C T G A G T C A G T C A A T G C G T A C A G T C A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

REL/MA0101.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCGCAAACCC--
--GGAAANCCCC
 A T C G G T A C A C T G T A G C C T G A G T C A G T C A A T G C G T A C A G T C A C G T A C G T
A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

NRF(NRF)/Promoter/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCGCAAACCC--
GCGCATGCGCAC
 A T C G G T A C A C T G T A G C C T G A G T C A G T C A A T G C G T A C A G T C A C G T A C G T
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCGCAAACCC
CTGCGCATGCGC
 A C G T A C G T A T C G G T A C A C T G T A G C C T G A G T C A G T C A A T G C G T A C A G T C
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C