Information for 3-CTCCGTGGAG (Motif 3)

A G T C A G C T A G T C T A G C A C T G G A C T A T C G A C T G C G T A T A C G
Reverse Opposite:
A T G C A C G T A G T C A T G C C T G A T G A C A T C G A C T G C T G A A C T G
p-value:1e-7
log p-value:-1.754e+01
Information Content per bp:1.840
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif24.49%
Number of Background Sequences with motif1392.9
Percentage of Background Sequences with motif3.08%
Average Position of motif in Targets587.9 +/- 283.8bp
Average Position of motif in Background575.1 +/- 283.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:CTCCGTGGAG
----GTGGAT
 A G T C A G C T A G T C T A G C A C T G G A C T A T C G A C T G C G T A T A C G
A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTCCGTGGAG
GCTCCG-----
 A C G T A G T C A G C T A G T C T A G C A C T G G A C T A T C G A C T G C G T A T A C G
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CTCCGTGGAG
NGTCCCNNGGGA-
 A C G T A C G T A C G T A G T C A G C T A G T C T A G C A C T G G A C T A T C G A C T G C G T A T A C G
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T

EBF2(EBF)/BrownAdipose-EBF2-ChIP-Seq(GSE97114)/Homer

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CTCCGTGGAG-
NABTCCCWDGGGAVH
 A C G T A C G T A C G T A C G T A G T C A G C T A G T C T A G C A C T G G A C T A T C G A C T G C G T A T A C G A C G T
C G T A C T G A A C T G A G C T A G T C G A T C G A T C G C A T C T G A C T A G C T A G T A C G T C G A T G C A G C A T

GLIS3/MA0737.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTCCGTGGAG----
CTTCGTGGGGGGTC
 A G T C A G C T A G T C T A G C A C T G G A C T A T C G A C T G C G T A T A C G A C G T A C G T A C G T A C G T
T A G C C A G T G C A T G A T C T C A G G A C T C T A G A C T G C T A G C T A G A C T G T A C G A G C T T G A C

GLIS1/MA0735.1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTCCGTGGAG-----
GCTTCGTGGGGGGTCT
 A C G T A G T C A G C T A G T C T A G C A C T G G A C T A T C G A C T G C G T A T A C G A C G T A C G T A C G T A C G T A C G T
T A C G G T A C C G A T G C A T G T A C A C T G G A C T A C T G C T A G A T C G A T C G C A T G A T C G G C A T T G A C C A G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CTCCGTGGAG
GTCCCCAGGGGA-
 A C G T A C G T A C G T A G T C A G C T A G T C T A G C A C T G G A C T A T C G A C T G C G T A T A C G
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CTCCGTGGAG--
CCCCCCCGGGGGGGT
 A C G T A C G T A C G T A G T C A G C T A G T C T A G C A C T G G A C T A T C G A C T G C G T A T A C G A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

Stat5a/MA1624.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTCCGTGGAG-
NNTTCTTGGAAN
 A C G T A G T C A G C T A G T C T A G C A C T G G A C T A T C G A C T G C G T A T A C G A C G T
C T G A C G A T G A C T G C A T T G A C G A C T C G A T C T A G C A T G G C T A C T G A G C T A

PB0102.1_Zic2_1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CTCCGTGGAG--
CCCCCCCGGGGGGGT
 A C G T A C G T A C G T A G T C A G C T A G T C T A G C A C T G G A C T A T C G A C T G C G T A T A C G A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T