Information for 2-AACTTCACGC (Motif 2)

C G T A G T C A A G T C A G C T A G C T A G T C C T G A T G A C C A T G G T A C
Reverse Opposite:
A C T G G T A C A C T G G A C T A C T G C T G A C T G A C T A G C A G T A C G T
p-value:1e-8
log p-value:-1.988e+01
Information Content per bp:1.748
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif26.53%
Number of Background Sequences with motif1388.1
Percentage of Background Sequences with motif3.10%
Average Position of motif in Targets446.5 +/- 318.3bp
Average Position of motif in Background516.2 +/- 301.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX3/MA0684.2/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AACTTCACGC
AAAACCTCAAAT
 A C G T A C G T C G T A G T C A A G T C A G C T A G C T A G T C C T G A T G A C C A T G G T A C
C G T A G C T A T C G A C T G A G A T C T G A C C G A T T G A C G C T A C T G A G C T A G A C T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:AACTTCACGC-
-----CACGCA
 C G T A G T C A A G T C A G C T A G C T A G T C C T G A T G A C C A T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AACTTCACGC-
-NYTTCCCGCC
 C G T A G T C A A G T C A G C T A G C T A G T C C T G A T G A C C A T G G T A C A C G T
A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C

TBX20/MA0689.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AACTTCACGC---
--CTTCACACCTA
 C G T A G T C A A G T C A G C T A G C T A G T C C T G A T G A C C A T G G T A C A C G T A C G T A C G T
A C G T A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

TBX18/MA1565.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AACTTCACGC----
--NTTCACACCTCC
 C G T A G T C A A G T C A G C T A G C T A G T C C T G A T G A C C A T G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A G C T G A C T G C A T A T G C G T C A A G T C C T G A A G T C A G T C A G C T G A T C G A T C

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AACTTCACGC
-ACGTCA---
 C G T A G T C A A G T C A G C T A G C T A G T C C T G A T G A C C A T G G T A C
A C G T C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T

PB0161.1_Rxra_2/Jaspar

Match Rank:7
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------AACTTCACGC
NNNNCAACCTTCGNGA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T C A A G T C A G C T A G C T A G T C C T G A T G A C C A T G G T A C
G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AACTTCACGC
-GCTTCC---
 C G T A G T C A A G T C A G C T A G C T A G T C C T G A T G A C C A T G G T A C
A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AACTTCACGC---
---TTCACACCTT
 C G T A G T C A A G T C A G C T A G C T A G T C C T G A T G A C C A T G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AACTTCACGC--
----TCACACCT
 C G T A G T C A A G T C A G C T A G C T A G T C C T G A T G A C C A T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T