Information for 2-AACG (Motif 13)

C G T A C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C G T
p-value:1e0
log p-value:-1.569e+00
Information Content per bp:1.530
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif81.63%
Number of Background Sequences with motif33886.5
Percentage of Background Sequences with motif75.56%
Average Position of motif in Targets457.8 +/- 277.6bp
Average Position of motif in Background566.1 +/- 318.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)2.38
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OVOL2/MA1545.1/Jaspar

Match Rank:1
Score:0.77
Offset:-5
Orientation:reverse strand
Alignment:-----AACG----
NNNNTAACGGTNN
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C T G A C G T A C G T A C G T A C G T
T A G C C T G A G T A C T C G A A G C T G T C A C T G A A G T C A T C G A T C G C G A T G C T A G A T C

RFX7/MA1554.1/Jaspar

Match Rank:2
Score:0.76
Offset:-5
Orientation:reverse strand
Alignment:-----AACG
NTAGCAACG
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C T G
C T G A G A C T T C G A T A C G G A T C C T G A C T G A A T G C T A C G

BARHL1/MA0877.2/Jaspar

Match Rank:3
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---AACG-
CTAAACGG
 A C G T A C G T A C G T C G T A C G T A A G T C A C T G A C G T
T A G C C G A T C G T A G T C A C G T A A G T C C T A G C A T G

OVOL1/MA1544.1/Jaspar

Match Rank:4
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----AACG-----
NANATAACGGTTTT
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
T A G C C T G A T C G A T C G A A C G T C G T A G T C A G T A C A C T G A C T G C G A T G C A T G A C T G C A T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:5
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AACG----
NHAACBGYYV
 A C G T A C G T C G T A C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

PB0046.1_Mybl1_1/Jaspar

Match Rank:6
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----AACG--------
NNANTAACGGTTNNNAN
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G A T G A C T C T G A T C G A A G T C A T C G C A T G G A C T G A C T C G A T G A C T G A T C G C T A C T G A

PB0045.1_Myb_1/Jaspar

Match Rank:7
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----AACG--------
NNNNTAACGGTTNNNAN
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G T A G A C T C T G A C G T A A G T C A T C G C A T G G A C T G A C T C A G T G T A C G T A C G C T A C G A T

HOXA9/MA0594.2/Jaspar

Match Rank:8
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----AACG--
NNTTTACGAC
 A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C T G A C G T A C G T
A T G C C T A G C G A T C G A T C G A T C T G A A G T C C A T G C T G A A G T C

BARHL2/MA0635.1/Jaspar

Match Rank:9
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----AACG--
GCTAAACGGT
 A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C T G A C G T A C G T
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:10
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AACG----
AACCGANA
 C G T A C G T A A G T C A C T G A C G T A C G T A C G T A C G T
C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A