| p-value: | 1e-9 |
| log p-value: | -2.198e+01 |
| Information Content per bp: | 1.863 |
| Number of Target Sequences with motif | 13.0 |
| Percentage of Target Sequences with motif | 26.53% |
| Number of Background Sequences with motif | 1164.5 |
| Percentage of Background Sequences with motif | 2.60% |
| Average Position of motif in Targets | 493.7 +/- 368.3bp |
| Average Position of motif in Background | 528.1 +/- 359.7bp |
| Strand Bias (log2 ratio + to - strand density) | -0.7 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| SVG Files for Logos: | forward logo
reverse opposite |
TATA-Box(TBP)/Promoter/Homer
| Match Rank: | 1 |
| Score: | 0.76
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --CTCTTAAAGG
GNCTATAAAAGG |
|
|
|
HOXC13/MA0907.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.69
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -CTCTTAAAGG
GCTCGTAAAAA |
|
|
|
PH0048.1_Hoxa13/Jaspar
| Match Rank: | 3 |
| Score: | 0.68
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----CTCTTAAAGG--
AAACCTCGTAAAATTT |
|
|
|
PH0068.1_Hoxc13/Jaspar
| Match Rank: | 4 |
| Score: | 0.68
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----CTCTTAAAGG--
AAAGCTCGTAAAATTT |
|
|
|
Nkx3-2/MA0122.3/Jaspar
| Match Rank: | 5 |
| Score: | 0.63
| | Offset: | -5
| | Orientation: | forward strand |
| Alignment: | -----CTCTTAAAGG
ATAACCACTTAAA-- |
|
|
|
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
| Match Rank: | 6 |
| Score: | 0.62
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---CTCTTAAAGG
AASCACTCAA--- |
|
|
|
Nkx3-1/MA0124.2/Jaspar
| Match Rank: | 7 |
| Score: | 0.62
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --CTCTTAAAGG
ACCACTTAA--- |
|
|
|
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer
| Match Rank: | 8 |
| Score: | 0.61
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --CTCTTAAAGG
NSCACTYVAV-- |
|
|
|
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer
| Match Rank: | 9 |
| Score: | 0.60
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --CTCTTAAAGG
RSCACTYRAG-- |
|
|
|
PB0048.1_Nkx3-1_1/Jaspar
| Match Rank: | 10 |
| Score: | 0.60
| | Offset: | -6
| | Orientation: | forward strand |
| Alignment: | ------CTCTTAAAGG-
CTTAACCACTTAAGGAT |
|
|
|
