Information for 4-CCCAMAAATA (Motif 4)

A T G C A G T C A G T C C G T A T G A C C G T A C G T A C T G A A C G T C G T A
Reverse Opposite:
A C G T C G T A A G C T A C G T A C G T A C T G A C G T A C T G A C T G A T C G
p-value:1e-8
log p-value:-1.992e+01
Information Content per bp:1.891
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif635.3
Percentage of Background Sequences with motif1.42%
Average Position of motif in Targets363.2 +/- 171.0bp
Average Position of motif in Background471.4 +/- 296.8bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:1
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:CCCAMAAATA--
KCCAAAAATAGC
 A T G C A G T C A G T C C G T A T G A C C G T A C G T A C T G A A C G T C G T A A C G T A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.78
Offset:1
Orientation:forward strand
Alignment:CCCAMAAATA-
-CCAAAAATAG
 A T G C A G T C A G T C C G T A T G A C C G T A C G T A C T G A A C G T C G T A A C G T
A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.78
Offset:0
Orientation:forward strand
Alignment:CCCAMAAATA--
DCYAAAAATAGM
 A T G C A G T C A G T C C G T A T G A C C G T A C G T A C T G A A C G T C G T A A C G T A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CCCAMAAATA---
ATGCTAAAAATAGAA
 A C G T A C G T A T G C A G T C A G T C C G T A T G A C C G T A C G T A C T G A A C G T C G T A A C G T A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CCCAMAAATA--
GCTAAAAATAGC
 A T G C A G T C A G T C C G T A T G A C C G T A C G T A C T G A A C G T C G T A A C G T A C G T
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

MEF2A/MA0052.4/Jaspar

Match Rank:6
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CCCAMAAATA----
TTCTAAAAATAGAAA
 A C G T A T G C A G T C A G T C C G T A T G A C C G T A C G T A C T G A A C G T C G T A A C G T A C G T A C G T A C G T
C G A T C A G T G A T C G A C T C G T A C G T A C G T A C G T A C G T A G C A T C T G A C T A G G T C A G C T A G C T A

MF0008.1_MADS_class/Jaspar

Match Rank:7
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CCCAMAAATA-
-CCATATATGG
 A T G C A G T C A G T C C G T A T G A C C G T A C G T A C T G A A C G T C G T A A C G T
A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G

MEF2D/MA0773.1/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCCAMAAATA--
ACTATAAATAGA
 A T G C A G T C A G T C C G T A T G A C C G T A C G T A C T G A A C G T C G T A A C G T A C G T
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

MEF2B/MA0660.1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCCAMAAATA--
GCTATAAATAGC
 A T G C A G T C A G T C C G T A T G A C C G T A C G T A C T G A A C G T C G T A A C G T A C G T
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

Stat5b/MA1625.1/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CCCAMAAATA
CATTTCCCAGAAATC
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C A G T C C G T A T G A C C G T A C G T A C T G A A C G T C G T A
A G T C C T G A G C A T A G C T C G A T G A T C G A T C G T A C C T G A A C T G C T G A T C G A T C G A G C A T T A G C