Information for 3-GCGC (Motif 12)

A C T G A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A G T C
p-value:1e0
log p-value:-9.506e-01
Information Content per bp:1.530
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif70.00%
Number of Background Sequences with motif29887.6
Percentage of Background Sequences with motif66.97%
Average Position of motif in Targets645.6 +/- 283.5bp
Average Position of motif in Background652.9 +/- 278.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)2.91
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F2/MA0864.2/Jaspar

Match Rank:1
Score:0.78
Offset:-6
Orientation:forward strand
Alignment:------GCGC------
GTTTTGGCGCCATTTC
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T C A G C G A T C G A T C G A T C G A T T A C G T A C G G T A C C T A G T A G C T A G C G T C A G C A T C G A T G C A T A G T C

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.77
Offset:-6
Orientation:forward strand
Alignment:------GCGC-----
ATAAAGGCGCGCGAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

E2F1/MA0024.3/Jaspar

Match Rank:3
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----GCGC----
TTTGGCGCCAAA
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.75
Offset:-7
Orientation:reverse strand
Alignment:-------GCGC------
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0009.1_E2F3_1/Jaspar

Match Rank:5
Score:0.75
Offset:-6
Orientation:forward strand
Alignment:------GCGC-----
ATAAGGGCGCGCGAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GCGC---
GGCGCGCT
 A C G T A C T G A G T C A C T G A G T C A C G T A C G T A C G T
C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.74
Offset:-6
Orientation:forward strand
Alignment:------GCGC-------
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

E2F4/MA0470.2/Jaspar

Match Rank:8
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----GCGC-----
NAATGGCGCCAAAA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G T A C A G T T A C G A T C G G T A C C A T G A T G C A T G C G T C A G T C A G C T A G C T A

PB0199.1_Zfp161_2/Jaspar

Match Rank:9
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---GCGC-------
GCCGCGCAGTGCGT
 A C G T A C G T A C G T A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

TCFL5/MA0632.2/Jaspar

Match Rank:10
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GCGC----
GTGCGCGTGA
 A C G T A C G T A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T
C A T G C A G T A T C G A G T C C T A G A G T C C T A G G A C T A C T G T G C A