Information for 4-GAGCTAACAG (Motif 4)

T C A G G T C A A T C G T G A C A G C T G T C A C T G A T A G C C G T A C T A G
Reverse Opposite:
A G T C A C G T A T C G A G C T C A G T T C G A A C T G T A G C A C G T A G T C
p-value:1e-6
log p-value:-1.513e+01
Information Content per bp:1.721
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif18.00%
Number of Background Sequences with motif799.8
Percentage of Background Sequences with motif1.80%
Average Position of motif in Targets517.8 +/- 258.3bp
Average Position of motif in Background528.7 +/- 322.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAGCTAACAG-
GGTGYTGACAGS
 A C G T T C A G G T C A A T C G T G A C A G C T G T C A C T G A T A G C C G T A C T A G A C G T
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------GAGCTAACAG-
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G G T C A A T C G T G A C A G C T G T C A C T G A T A G C C G T A C T A G A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

SOX12/MA1561.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GAGCTAACAG--
-ACCGAACAATG
 T C A G G T C A A T C G T G A C A G C T G T C A C T G A T A G C C G T A C T A G A C G T A C G T
A C G T G T C A G T A C G A T C C A T G T G C A T C G A A G T C C G T A T G C A G A C T T A C G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAGCTAACAG-
-VGCTGWCAVB
 T C A G G T C A A T C G T G A C A G C T G T C A C T G A T A G C C G T A C T A G A C G T
A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GAGCTAACAG-
-----CACAGN
 T C A G G T C A A T C G T G A C A G C T G T C A C T G A T A G C C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GAGCTAACAG
--RHTGWCAR
 T C A G G T C A A T C G T G A C A G C T G T C A C T G A T A G C C G T A C T A G
A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A

PB0172.1_Sox1_2/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAGCTAACAG------
-NNNTAACAATTATAN
 T C A G G T C A A T C G T G A C A G C T G T C A C T G A T A G C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GAGCTAACAG
-ARNTGACA-
 T C A G G T C A A T C G T G A C A G C T G T C A C T G A T A G C C G T A C T A G
A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAGCTAACAG----
AAAAATAACAAACGG
 A C G T T C A G G T C A A T C G T G A C A G C T G T C A C T G A T A G C C G T A C T A G A C G T A C G T A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GAGCTAACAG
---TTGACAG
 T C A G G T C A A T C G T G A C A G C T G T C A C T G A T A G C C G T A C T A G
A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G