Information for 3-TGCAGCTTTA (Motif 3)

C G A T C T A G A T G C C G T A A T C G A G T C A G C T A C G T A C G T C G T A
Reverse Opposite:
G C A T C G T A C G T A C T G A C T A G A T G C A C G T A T C G G A T C C G T A
p-value:1e-8
log p-value:-2.038e+01
Information Content per bp:1.851
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif24.00%
Number of Background Sequences with motif1030.6
Percentage of Background Sequences with motif2.33%
Average Position of motif in Targets392.3 +/- 264.3bp
Average Position of motif in Background510.6 +/- 317.3bp
Strand Bias (log2 ratio + to - strand density)-1.9
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf12/MA0521.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGCAGCTTTA
NNGCAGCTGTT
 A C G T C G A T C T A G A T G C C G T A A T C G A G T C A G C T A C G T A C G T C G T A
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

PB0146.1_Mafk_2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGCAGCTTTA--
CCTTGCAATTTTTNN
 A C G T A C G T A C G T C G A T C T A G A T G C C G T A A T C G A G T C A G C T A C G T A C G T C G T A A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGCAGCTTTA
--CAGCTGTT
 C G A T C T A G A T G C C G T A A T C G A G T C A G C T A C G T A C G T C G T A
A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

MYOG/MA0500.2/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGCAGCTTTA-
CAGCAGCTGCTG
 A C G T C G A T C T A G A T G C C G T A A T C G A G T C A G C T A C G T A C G T C G T A A C G T
T A G C C T G A T C A G A G T C T C G A A C T G T G A C A G C T T C A G A G T C G A C T A T C G

Ptf1a(var.2)/MA1619.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGCAGCTTTA-
NNACAGCTGTNN
 A C G T C G A T C T A G A T G C C G T A A T C G A G T C A G C T A C G T A C G T C G T A A C G T
T C A G T G A C T C G A G T A C T C G A A T C G T A G C A G C T A C T G A G C T A C T G A G T C

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGCAGCTTTA-
-ACAGCTGTTV
 C G A T C T A G A T G C C G T A A T C G A G T C A G C T A C G T A C G T C G T A A C G T
A C G T T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A

MYF5/MA1641.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGCAGCTTTA-
NNACAGCTGTNN
 A C G T C G A T C T A G A T G C C G T A A T C G A G T C A G C T A C G T A C G T C G T A A C G T
T A C G T C G A T C G A T A G C C G T A A T C G T A G C G C A T A T C G A G C T A G C T A T G C

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGCAGCTTTA-
-GCAGCTGTNN
 C G A T C T A G A T G C C G T A A T C G A G T C A G C T A C G T A C G T C G T A A C G T
A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

BHLHE22(var.2)/MA1635.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGCAGCTTTA
NNCAGCTGNN
 C G A T C T A G A T G C C G T A A T C G A G T C A G C T A C G T A C G T C G T A
A T G C T A C G A T G C T C G A A T C G T A G C A G C T T C A G A T G C T A C G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGCAGCTTTA
CAGCAGCTGN-
 A C G T C G A T C T A G A T G C C G T A A T C G A G T C A G C T A C G T A C G T C G T A
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T