Information for 4-GTTA (Motif 8)

A C T G A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A G T C
p-value:1e0
log p-value:-6.480e-01
Information Content per bp:1.530
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif87.76%
Number of Background Sequences with motif39262.9
Percentage of Background Sequences with motif86.76%
Average Position of motif in Targets445.9 +/- 279.7bp
Average Position of motif in Background490.6 +/- 333.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)3.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HMBOX1/MA0895.1/Jaspar

Match Rank:1
Score:0.80
Offset:-4
Orientation:forward strand
Alignment:----GTTA--
ACTAGTTAAC
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C G T
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

PB0081.1_Tcf1_1/Jaspar

Match Rank:2
Score:0.80
Offset:-6
Orientation:reverse strand
Alignment:------GTTA-------
NNNTTAGTTAACTNANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:3
Score:0.77
Offset:-6
Orientation:reverse strand
Alignment:------GTTA-------
NTTTTAGTTAACNNAGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

PB0109.1_Bbx_2/Jaspar

Match Rank:4
Score:0.77
Offset:-5
Orientation:forward strand
Alignment:-----GTTA--------
TGATTGTTAACAGTTGG
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

OVOL2/MA1545.1/Jaspar

Match Rank:5
Score:0.77
Offset:-5
Orientation:forward strand
Alignment:-----GTTA----
GTACCGTTATGTG
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T
C T A G C G A T G C T A T A G C A T G C A C T G A G C T A C G T T C G A A G C T C A T G G A C T A T C G

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:6
Score:0.76
Offset:-5
Orientation:reverse strand
Alignment:-----GTTA-
BRRCVGTTDN
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.76
Offset:-10
Orientation:reverse strand
Alignment:----------GTTA-
NMMNBAAAGGGTTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T
T A C G T G C A G T C A G C A T A C T G T G C A T C G A C T G A C A T G C T A G A C T G C A G T G A C T C G T A G T C A

PH0040.1_Hmbox1/Jaspar

Match Rank:8
Score:0.74
Offset:-8
Orientation:forward strand
Alignment:--------GTTA-----
GAAAACTAGTTAACATC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

OVOL1/MA1544.1/Jaspar

Match Rank:9
Score:0.73
Offset:-6
Orientation:forward strand
Alignment:------GTTA----
AAAACCGTTATTTG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T
C G T A C T G A C G T A G C T A A G T C A G T C C A T G A C G T A C G T G T C A A G C T A G C T G A C T A T C G

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:10
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----GTTA
GGCVGTTR
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A