Information for 6-GCTGATTAAA (Motif 6)

A C T G A G T C A C G T A C T G C G T A A C G T A C G T C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T C G T A C G T A A C G T A G T C C G T A A C T G A G T C
p-value:1e-3
log p-value:-8.662e+00
Information Content per bp:1.530
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif18.37%
Number of Background Sequences with motif1885.6
Percentage of Background Sequences with motif4.17%
Average Position of motif in Targets394.5 +/- 239.5bp
Average Position of motif in Background454.4 +/- 305.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F2/MA0793.1/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GCTGATTAAA
AGCTCATTAT-
 A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C G T C G T A C G T A C G T A
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.74
Offset:4
Orientation:forward strand
Alignment:GCTGATTAAA
----ATTAAA
 A C T G A G T C A C G T A C T G C G T A A C G T A C G T C G T A C G T A C G T A
A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A

ARGFX/MA1463.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GCTGATTAAA
TCTAATTAAA
 A C T G A G T C A C G T A C T G C G T A A C G T A C G T C G T A C G T A C G T A
C A G T G A T C G A C T G T C A C G T A A C G T A G C T C T G A C T G A G T C A

DUXA/MA0884.1/Jaspar

Match Rank:4
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GCTGATTAAA----
-NTGATTAAATTAN
 A C T G A G T C A C G T A C T G C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G

LBX1/MA0618.1/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GCTGATTAAA
-CTAATTAA-
 A C T G A G T C A C G T A C T G C G T A A C G T A C G T C G T A C G T A C G T A
A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A A C G T

NKX6-1/MA0674.1/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GCTGATTAAA
-GTAATTAA-
 A C T G A G T C A C G T A C T G C G T A A C G T A C G T C G T A C G T A C G T A
A C G T T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T

NKX6-3/MA1530.1/Jaspar

Match Rank:7
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GCTGATTAAA
-CTCATTAAA
 A C T G A G T C A C G T A C T G C G T A A C G T A C G T C G T A C G T A C G T A
A C G T T A G C A G C T A G T C C G T A A C G T A G C T C T G A G C T A G C T A

OTX1/MA0711.1/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GCTGATTAAA
-CGGATTAN-
 A C T G A G T C A C G T A C T G C G T A A C G T A C G T C G T A C G T A C G T A
A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T

DUX(Homeobox)/C2C12-Dux-ChIP-Seq(GSE87279)/Homer

Match Rank:9
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GCTGATTAAA-----
NTTGATTGAATCWGV
 A C T G A G T C A C G T A C T G C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G A T T C A G C G T A A C G T A C G T T C A G C T G A C G T A A C G T A G T C G C T A T A C G T C A G

EVX2/MA0888.1/Jaspar

Match Rank:10
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCTGATTAAA
GGTAATTAGC
 A C T G A G T C A C G T A C T G C G T A A C G T A C G T C G T A C G T A C G T A
T A C G T A C G G A C T T G C A T C G A A C G T A G C T C T G A T A C G A T G C