Information for 2-GAGCAGCGCC (Motif 2)

A C T G G T C A C T A G A G T C C G T A A C T G A T G C A T C G A T G C A T G C
Reverse Opposite:
A T C G A T C G A T G C A T C G A G T C C G A T A C T G A G T C A C G T A G T C
p-value:1e-7
log p-value:-1.738e+01
Information Content per bp:1.859
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif28.57%
Number of Background Sequences with motif2078.7
Percentage of Background Sequences with motif4.59%
Average Position of motif in Targets597.4 +/- 286.6bp
Average Position of motif in Background635.8 +/- 368.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF341/MA1655.1/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GAGCAGCGCC
GGGAACAGCCAC
 A C G T A C G T A C T G G T C A C T A G A G T C C G T A A C T G A T G C A T C G A T G C A T G C
C A T G C T A G T A C G T G C A C T G A A T G C T C G A A T C G A T G C G T A C T C G A T A G C

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GAGCAGCGCC
GGAACAGCCG-
 A C G T A C T G G T C A C T A G A G T C C G T A A C T G A T G C A T C G A T G C A T G C
C T A G A C T G T G C A G T C A A T G C C G T A A T C G A T G C A G T C C T A G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GAGCAGCGCC
---CAGCC--
 A C T G G T C A C T A G A G T C C G T A A C T G A T G C A T C G A T G C A T G C
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GAGCAGCGCC-
GCCGCGCAGTGCGT
 A C G T A C G T A C G T A C T G G T C A C T A G A G T C C G T A A C T G A T G C A T C G A T G C A T G C A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAGCAGCGCC
-CACAGN---
 A C T G G T C A C T A G A G T C C G T A A C T G A T G C A T C G A T G C A T G C
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAGCAGCGCC-
-AGCAGCTGCT
 A C T G G T C A C T A G A G T C C G T A A C T G A T G C A T C G A T G C A T G C A C G T
A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GAGCAGCGCC-
SSRGCAGCTGCH
 A C G T A C T G G T C A C T A G A G T C C G T A A C T G A T G C A T C G A T G C A T G C A C G T
T A C G T A C G C T A G T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A C T

ZNF682/MA1599.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAGCAGCGCC---
CGGGCCAAGCCCCTAT
 A C G T A C G T A C G T A C T G G T C A C T A G A G T C C G T A A C T G A T G C A T C G A T G C A T G C A C G T A C G T A C G T
A G T C T C A G C T A G T C A G T A G C A G T C T G C A T G C A A C T G A G T C A G T C A T G C G T A C C G A T T C G A A G C T

NHLH1/MA0048.2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GAGCAGCGCC-
-CGCAGCTGCG
 A C T G G T C A C T A G A G T C C G T A A C T G A T G C A T C G A T G C A T G C A C G T
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAGCAGCGCC---
-AGCAGCTGCTNN
 A C T G G T C A C T A G A G T C C G T A A C T G A T G C A T C G A T G C A T G C A C G T A C G T A C G T
A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C