Information for 6-GCKCCRCGGA (Motif 6)

A C T G G T A C A C G T A T G C A G T C T C A G T G A C A C T G A C T G G T C A
Reverse Opposite:
A C G T A G T C A G T C A C T G A G T C A C T G A T C G G T C A A C T G T G A C
p-value:1e-4
log p-value:-1.090e+01
Information Content per bp:1.735
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif38.78%
Number of Background Sequences with motif6331.2
Percentage of Background Sequences with motif14.13%
Average Position of motif in Targets636.2 +/- 247.8bp
Average Position of motif in Background630.9 +/- 345.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.53
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCKCCRCGGA
GCTCCG----
 A C T G G T A C A C G T A T G C A G T C T C A G T G A C A C T G A C T G G T C A
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCKCCRCGGA-----
---NCGCGGACGTTG
 A C T G G T A C A C G T A T G C A G T C T C A G T G A C A C T G A C T G G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GCKCCRCGGA----
----DCCGGAARYN
 A C T G G T A C A C G T A T G C A G T C T C A G T G A C A C T G A C T G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G

ZBTB14/MA1650.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCKCCRCGGA---
-CCCCGCGCACCC
 A C T G G T A C A C G T A T G C A G T C T C A G T G A C A C T G A C T G G T C A A C G T A C G T A C G T
A C G T T A G C A T G C T A G C A T G C T A C G A T G C T A C G T A G C T G C A A T G C T A G C A T G C

REST/MA0138.2/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GCKCCRCGGA-------
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T A C T G G T A C A C G T A T G C A G T C T C A G T G A C A C T G A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCKCCRCGGA-----
---NDCAGGAARTNN
 A C T G G T A C A C G T A T G C A G T C T C A G T G A C A C T G A C T G G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCKCCRCGGA-------
TCAGCACCATGGACAGCTCC
 A C G T A C G T A C G T A C T G G T A C A C G T A T G C A G T C T C A G T G A C A C T G A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GCKCCRCGGA----
----RCCGGAARYN
 A C T G G T A C A C G T A T G C A G T C T C A G T G A C A C T G A C T G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G

HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GCKCCRCGGA-----
-----GCGGACCBWA
 A C T G G T A C A C G T A T G C A G T C T C A G T G A C A C T G A C T G G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G G T A C A C T G A C T G G T C A A T G C A T G C A T G C G C T A T C G A

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCKCCRCGGA
NGTCCCNNGGGA
 A C G T A C G T A C T G G T A C A C G T A T G C A G T C T C A G T G A C A C T G A C T G G T C A
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A