Information for 4-GTAGCCTCTT (Motif 4)

A C T G G A C T C G T A A C T G A G T C A G T C C G A T A G T C A G C T A C G T
Reverse Opposite:
C G T A C T G A A C T G C G T A C T A G A C T G A G T C C G A T C T G A A G T C
p-value:1e-6
log p-value:-1.443e+01
Information Content per bp:1.849
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif16.33%
Number of Background Sequences with motif649.7
Percentage of Background Sequences with motif1.45%
Average Position of motif in Targets535.4 +/- 249.2bp
Average Position of motif in Background522.5 +/- 308.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GTAGCCTCTT-
-KGGCCYCWTD
 A C T G G A C T C G T A A C T G A G T C A G T C C G A T A G T C A G C T A C G T A C G T
A C G T C A T G C A T G T A C G G T A C A T G C G A T C A T G C G C T A A G C T C T G A

PH0115.1_Nkx2-6/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTAGCCTCTT------
TAAGCCACTTAACATT
 A C T G G A C T C G T A A C T G A G T C A G T C C G A T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:3
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------GTAGCCTCTT
ADGGYAGYAGCATCT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A C T C G T A A C T G A G T C A G T C C G A T A G T C A G C T A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTAGCCTCTT------
TAAGCCACTTGAAATT
 A C T G G A C T C G T A A C T G A G T C A G T C C G A T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

PH0113.1_Nkx2-4/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTAGCCTCTT------
TAAGCCACTTGAAATT
 A C T G G A C T C G T A A C T G A G T C A G T C C G A T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

PB0154.1_Osr1_2/Jaspar

Match Rank:6
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------GTAGCCTCTT
NNNTTAGGTAGCNTNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A C T C G T A A C T G A G T C A G T C C G A T A G T C A G C T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTAGCCTCTT------
TAAGCCACTTGAATTT
 A C T G G A C T C G T A A C T G A G T C A G T C C G A T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTAGCCTCTT------
CTTAACCACTTAAGGAT
 A C G T A C T G G A C T C G T A A C T G A G T C A G T C C G A T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTAGCCTCTT--
--AASCACTCAA
 A C T G G A C T C G T A A C T G A G T C A G T C C G A T A G T C A G C T A C G T A C G T A C G T
A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

NKX2-3/MA0672.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GTAGCCTCTT---
---ACCACTTGAA
 A C T G G A C T C G T A A C T G A G T C A G T C C G A T A G T C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A