Information for 6-TGTTTGAAAC (Motif 6)

A C G T A C T G A C G T A C G T A C G T T A C G C G T A C G T A C G T A G T A C
Reverse Opposite:
A C T G C G A T A C G T A C G T A T G C C G T A G T C A C G T A T G A C C G T A
p-value:1e-6
log p-value:-1.503e+01
Information Content per bp:1.858
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif20.41%
Number of Background Sequences with motif1119.9
Percentage of Background Sequences with motif2.47%
Average Position of motif in Targets560.8 +/- 245.3bp
Average Position of motif in Background453.2 +/- 392.8bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.85
Offset:2
Orientation:reverse strand
Alignment:TGTTTGAAAC--
--TTTGAAACCG
 A C G T A C T G A C G T A C G T A C G T T A C G C G T A C G T A C G T A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TGTTTGAAAC
-ATTTGAATT
 A C G T A C T G A C G T A C G T A C G T T A C G C G T A C G T A C G T A G T A C
A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

DUX(Homeobox)/C2C12-Dux-ChIP-Seq(GSE87279)/Homer

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTGAAAC---
NTTGATTGAATCWGV
 A C G T A C G T A C G T A C T G A C G T A C G T A C G T T A C G C G T A C G T A C G T A G T A C A C G T A C G T A C G T
A C G T C G A T C G A T T C A G C G T A A C G T A C G T T C A G C T G A C G T A A C G T A G T C G C T A T A C G T C A G

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TGTTTGAAAC--
--ACTGAAACCA
 A C G T A C T G A C G T A C G T A C G T T A C G C G T A C G T A C G T A G T A C A C G T A C G T
A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

PRDM4/MA1647.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TGTTTGAAAC----
---NAGAAACAGNN
 A C G T A C T G A C G T A C G T A C G T T A C G C G T A C G T A C G T A G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGTTTGAAAC
AGGTGTGAAA-
 A C G T A C G T A C T G A C G T A C G T A C G T T A C G C G T A C G T A C G T A G T A C
C T G A C T A G A C T G G C A T C T A G G C A T A T C G C T G A C G T A G T C A A C G T

TBR1/MA0802.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGTTTGAAAC
AGGTGTGAAA-
 A C G T A C G T A C T G A C G T A C G T A C G T T A C G C G T A C G T A C G T A G T A C
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TGTTTGAAAC--
GAAAAGGTGTGAAAATT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T T A C G C G T A C G T A C G T A G T A C A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

Foxf1/MA1606.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTGAAAC
NNTGTTTACAN-
 A C G T A C G T A C G T A C T G A C G T A C G T A C G T T A C G C G T A C G T A C G T A G T A C
G C A T G A C T C G A T T C A G G A C T C G A T C G A T G T C A A G T C G C T A G C A T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGTTTGAAAC--
CCGTATTATAAACAA
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T T A C G C G T A C G T A C G T A G T A C A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A