Information for 5-CGGAGCATCC (Motif 5)

A G T C T A C G C T A G C T G A A C T G A G T C G T C A A C G T A T G C A G T C
Reverse Opposite:
A C T G A T C G T G C A A C G T A C T G A G T C A G C T A G T C A T G C A C T G
p-value:1e-7
log p-value:-1.620e+01
Information Content per bp:1.855
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif20.41%
Number of Background Sequences with motif984.8
Percentage of Background Sequences with motif2.17%
Average Position of motif in Targets576.1 +/- 227.9bp
Average Position of motif in Background618.5 +/- 371.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CGGAGCATCC
CGGAGC----
 A G T C T A C G C T A G C T G A A C T G A G T C G T C A A C G T A T G C A G T C
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGGAGCATCC-
-GGAACAGCCG
 A G T C T A C G C T A G C T G A A C T G A G T C G T C A A C G T A T G C A G T C A C G T
A C G T C T A G A C T G T G C A G T C A A T G C C G T A A T C G A T G C A G T C C T A G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGGAGCATCC
GGGAGGACNG
 A G T C T A C G C T A G C T G A A C T G A G T C G T C A A C G T A T G C A G T C
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGGAGCATCC---
-GGACCACCCACG
 A G T C T A C G C T A G C T G A A C T G A G T C G T C A A C G T A T G C A G T C A C G T A C G T A C G T
A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

ZNF341/MA1655.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CGGAGCATCC--
GGGAACAGCCAC
 A G T C T A C G C T A G C T G A A C T G A G T C G T C A A C G T A T G C A G T C A C G T A C G T
C A T G C T A G T A C G T G C A C T G A A T G C T C G A A T C G A T G C G T A C T C G A T A G C

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CGGAGCATCC--
TACCATAGCAACGGT
 A C G T A C G T A C G T A G T C T A C G C T A G C T G A A C T G A G T C G T C A A C G T A T G C A G T C A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CGGAGCATCC--
CCGCATAGCAACGGA
 A C G T A C G T A C G T A G T C T A C G C T A G C T G A A C T G A G T C G T C A A C G T A T G C A G T C A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:8
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------CGGAGCATCC------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T A C G C T A G C T G A A C T G A G T C G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CGGAGCATCC
--CAGCC---
 A G T C T A C G C T A G C T G A A C T G A G T C G T C A A C G T A T G C A G T C
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CGGAGCATCC--------
--GTACATCCGGATTTTT
 A G T C T A C G C T A G C T G A A C T G A G T C G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T