Information for 4-TTTSAACAGY (Motif 4)

A C G T A C G T C G A T T A C G G C T A C T G A G T A C G C T A C A T G A G T C
Reverse Opposite:
C T A G G T A C C G A T C A T G A G C T C G A T A T G C G C T A T G C A T G C A
p-value:1e-6
log p-value:-1.517e+01
Information Content per bp:1.525
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif16.33%
Number of Background Sequences with motif580.3
Percentage of Background Sequences with motif1.31%
Average Position of motif in Targets266.4 +/- 281.1bp
Average Position of motif in Background489.0 +/- 366.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TTTSAACAGY
ATTTGAATT--
 A C G T A C G T A C G T C G A T T A C G G C T A C T G A G T A C G C T A C A T G A G T C
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTTSAACAGY
TTTGAAACCG
 A C G T A C G T C G A T T A C G G C T A C T G A G T A C G C T A C A T G A G T C
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTTSAACAGY
SCTGTCARCACC
 A C G T A C G T A C G T A C G T C G A T T A C G G C T A C T G A G T A C G C T A C A T G A G T C
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTTSAACAGY
CCTTTGATST--
 A C G T A C G T A C G T A C G T C G A T T A C G G C T A C T G A G T A C G C T A C A T G A G T C
A T G C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A C G T A C G T

TCF7/MA0769.2/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTTSAACAGY
TCCTTTGATGT--
 A C G T A C G T A C G T A C G T A C G T C G A T T A C G G C T A C T G A G T A C G C T A C A T G A G T C
A C G T A G T C T G A C G C A T C G A T C G A T A C T G C G T A C G A T T A C G G C A T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTTSAACAGY
CCTTTGATGT--
 A C G T A C G T A C G T A C G T C G A T T A C G G C T A C T G A G T A C G C T A C A T G A G T C
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTTSAACAGY
TNCCTTTGATCTTN
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T T A C G G C T A C T G A G T A C G C T A C A T G A G T C
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

Foxf1/MA1606.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTTSAACAGY
ATGTAAACAAA
 A C G T A C G T A C G T C G A T T A C G G C T A C T G A G T A C G C T A C A T G A G T C
C G T A C G A T T C A G C A G T G C T A G C T A C T G A A G T C G C T A C T G A C G T A

ZNF341/MA1655.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTTSAACAGY---
-GGGAACAGCCAC
 A C G T A C G T C G A T T A C G G C T A C T G A G T A C G C T A C A T G A G T C A C G T A C G T A C G T
A C G T C A T G C T A G T A C G T G C A C T G A A T G C T C G A A T C G A T G C G T A C T C G A T A G C

PB0082.1_Tcf3_1/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------TTTSAACAGY-
NNTTCCTTTGATCTANA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T T A C G G C T A C T G A G T A C G C T A C A T G A G T C A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A