Information for 2-CAGTTTCCAA (Motif 2)

G T A C G T C A C T A G A G C T A G C T A C G T A G T C G T A C C G T A C G T A
Reverse Opposite:
C G A T A C G T A C T G C T A G G T C A C T G A C T G A G A T C A C G T A C T G
p-value:1e-7
log p-value:-1.838e+01
Information Content per bp:1.789
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif24.49%
Number of Background Sequences with motif1260.1
Percentage of Background Sequences with motif2.85%
Average Position of motif in Targets444.4 +/- 259.8bp
Average Position of motif in Background511.5 +/- 348.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC4/MA1525.1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CAGTTTCCAA-
-ATTTTCCATN
 G T A C G T C A C T A G A G C T A G C T A C G T A G T C G T A C C G T A C G T A A C G T
A C G T C G T A A C G T C A G T A C G T A C G T A G T C A G T C C T G A G A C T A G C T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CAGTTTCCAA-
-ATTTTCCATT
 G T A C G T C A C T A G A G C T A G C T A C G T A G T C G T A C C G T A C G T A A C G T
A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

NFATC1/MA0624.1/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CAGTTTCCAA-
-ATTTTCCATT
 G T A C G T C A C T A G A G C T A G C T A C G T A G T C G T A C C G T A C G T A A C G T
A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CAGTTTCCAA
CGGTTTCAAA
 G T A C G T C A C T A G A G C T A G C T A C G T A G T C G T A C C G T A C G T A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

NFATC3/MA0625.1/Jaspar

Match Rank:5
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CAGTTTCCAA-
-ATTTTCCATT
 G T A C G T C A C T A G A G C T A G C T A C G T A G T C G T A C C G T A C G T A A C G T
A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CAGTTTCCAA-
-ATTTTCCATT
 G T A C G T C A C T A G A G C T A G C T A C G T A G T C G T A C C G T A C G T A A C G T
A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CAGTTTCCAA
--TTTTCCA-
 G T A C G T C A C T A G A G C T A G C T A C G T A G T C G T A C C G T A C G T A
A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T

PRDM4/MA1647.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAGTTTCCAA
GTCTGTTTCTA-
 A C G T A C G T G T A C G T C A C T A G A G C T A G C T A C G T A G T C G T A C C G T A C G T A
C T A G C A G T T A G C C G A T T C A G G C A T A G C T G C A T G T A C G C A T G C T A A C G T

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CAGTTTCCAA--
--GGTGCCAAGT
 G T A C G T C A C T A G A G C T A G C T A C G T A G T C G T A C C G T A C G T A A C G T A C G T
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CAGTTTCCAA----
NTNNCGTATCCAAGTNN
 A C G T A C G T A C G T G T A C G T C A C T A G A G C T A G C T A C G T A G T C G T A C C G T A C G T A A C G T A C G T A C G T A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G