Information for 1-GGAGTACTGC (Motif 1)

A C T G C T A G C G T A C T A G G A C T T C G A A G T C A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A C T A G A G C T C T G A A G T C A C G T A G T C G T A C
p-value:1e-9
log p-value:-2.113e+01
Information Content per bp:1.857
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif22.45%
Number of Background Sequences with motif760.3
Percentage of Background Sequences with motif1.72%
Average Position of motif in Targets463.5 +/- 297.5bp
Average Position of motif in Background553.2 +/- 331.1bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----GGAGTACTGC---
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T A C T G C T A G C G T A C T A G G A C T T C G A A G T C A C G T A C T G A G T C A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGAGTACTGC
GGGAGGACNG-
 A C G T A C T G C T A G C G T A C T A G G A C T T C G A A G T C A C G T A C T G A G T C
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGAGTACTGC----
TTCNAAGTACTTNNNNN
 A C G T A C G T A C G T A C T G C T A G C G T A C T A G G A C T T C G A A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGAGTACTGC------
AATCGCACTGCATTCCG
 A C G T A C T G C T A G C G T A C T A G G A C T T C G A A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PH0116.1_Nkx2-9/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GGAGTACTGC---
NATTTAAGTACTTNAAA
 A C G T A C G T A C G T A C G T A C T G C T A G C G T A C T A G G A C T T C G A A G T C A C G T A C T G A G T C A C G T A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGAGTACTGC
TTAAGTGCTT-
 A C G T A C T G C T A G C G T A C T A G G A C T T C G A A G T C A C G T A C T G A G T C
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T

POL002.1_INR/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GGAGTACTGC
--NNNANTGA
 A C T G C T A G C G T A C T A G G A C T T C G A A G T C A C G T A C T G A G T C
A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A

PH0117.1_Nkx3-1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GGAGTACTGC---
NATTTAAGTACTTANNA
 A C G T A C G T A C G T A C G T A C T G C T A G C G T A C T A G G A C T T C G A A G T C A C G T A C T G A G T C A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.54
Offset:-9
Orientation:reverse strand
Alignment:---------GGAGTACTGC-
TGGCCANNNNNGGAACTGCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G C G T A C T A G G A C T T C G A A G T C A C G T A C T G A G T C A C G T
G C A T C T A G C A T G G A T C G A T C C T G A G A T C G C A T A C T G A G C T C A G T C T A G C A T G G C T A C G T A A G T C C G A T C T A G A T G C G C T A

PITX2/MA1547.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGAGTACTGC
GGGATTAN---
 A C G T A C T G C T A G C G T A C T A G G A C T T C G A A G T C A C G T A C T G A G T C
A C T G T C A G C T A G G T C A A C G T A G C T C G T A C A G T A C G T A C G T A C G T