Information for 6-TGTGCGAAGT (Motif 6)

A G C T A C T G C G A T A C T G G T A C A C T G C T G A C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C C G A T A G C T A G T C A C T G A G T C G C T A A G T C C T G A
p-value:1e-6
log p-value:-1.391e+01
Information Content per bp:1.872
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif296.6
Percentage of Background Sequences with motif0.67%
Average Position of motif in Targets606.2 +/- 243.9bp
Average Position of motif in Background536.7 +/- 285.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGTGCGAAGT-
NNTGCCAAGNN
 A G C T A C T G C G A T A C T G G T A C A C T G C T G A C G T A A C T G A C G T A C G T
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A

ZNF75D/MA1601.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGTGCGAAGT
ATGTGGGAAA-
 A C G T A G C T A C T G C G A T A C T G G T A C A C T G C T G A C G T A A C T G A C G T
T C G A C A G T C T A G G A C T T C A G C A T G A T C G G T C A T C G A C T G A A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGTGCGAAGT
AAGGTGTKAA--
 A C G T A C G T A G C T A C T G C G A T A C T G G T A C A C T G C T G A C G T A A C T G A C G T
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGTGCGAAGT
GGTGCCAAGT
 A G C T A C T G C G A T A C T G G T A C A C T G C T G A C G T A A C T G A C G T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TGTGCGAAGT
----NGAAGC
 A G C T A C T G C G A T A C T G G T A C A C T G C T G A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

Znf281/MA1630.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGTGCGAAGT
GGTGGGGGAGG-
 A C G T A C G T A G C T A C T G C G A T A C T G G T A C A C T G C T G A C G T A A C T G A C G T
C T A G T A C G A G C T T A C G T A C G T A C G A T C G A C T G G T C A C A T G T C A G A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGTGCGAAGT
CSTGGGAAAD
 A G C T A C T G C G A T A C T G G T A C A C T G C T G A C G T A A C T G A C G T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGTGCGAAGT
RGKGGGCGGAGC
 A C G T A C G T A G C T A C T G C G A T A C T G G T A C A C T G C T G A C G T A A C T G A C G T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

RBPJ/MA1116.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGTGCGAAGT
CCTGGGAAAG
 A G C T A C T G C G A T A C T G G T A C A C T G C T G A C G T A A C T G A C G T
A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G

TBX18/MA1565.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TGTGCGAAGT
GGAGGTGTGAAA-
 A C G T A C G T A C G T A G C T A C T G C G A T A C T G G T A C A C T G C T G A C G T A A C T G A C G T
C T A G C T A G T C G A T C A G C T A G G A C T T C A G C A G T T A C G C G T A C T G A T C G A A C G T