Information for 5-AAAAATCTCC (Motif 5)

C G T A G T C A C G T A C G T A C G T A A C G T A G T C A C G T A G T C A G T C
Reverse Opposite:
A C T G C T A G C G T A A C T G C G T A C G A T C G A T C G A T A C G T A C G T
p-value:1e-6
log p-value:-1.603e+01
Information Content per bp:1.888
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif18.75%
Number of Background Sequences with motif744.2
Percentage of Background Sequences with motif1.69%
Average Position of motif in Targets494.5 +/- 352.3bp
Average Position of motif in Background487.2 +/- 411.9bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.2/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAAAATCTCC----
-CAAATCCCCACTT
 C G T A G T C A C G T A C G T A C G T A A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T G T A C G C T A T G C A T G C A C G A T T A G C G T A C G A T C G A T C G C T A G A T C G C A T A G C T

RELB/MA1117.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAAAATCTCC--
-GAATTCCCCGG
 C G T A G T C A C G T A C G T A C G T A A C G T A G T C A C G T A G T C A G T C A C G T A C G T
A C G T C T A G C T G A C G T A C G A T G A C T G A T C G T A C G T A C T A G C C A T G T A C G

PB0165.1_Sox11_2/Jaspar

Match Rank:3
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AAAAATCTCC
NNCNNAACAATTNT--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T C A C G T A C G T A C G T A A C G T A G T C A C G T A G T C A G T C
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AAAAATCTCC-
NNCCATAAATCATNN
 A C G T A C G T A C G T A C G T C G T A G T C A C G T A C G T A C G T A A C G T A G T C A C G T A G T C A G T C A C G T
C T G A T C A G G A T C G T A C T C G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G C A T G C A T G A C T

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAAAATCTCC-----
NNAATTCTCGNTNAN
 C G T A G T C A C G T A C G T A C G T A A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0175.1_Sox4_2/Jaspar

Match Rank:6
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------AAAAATCTCC-
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T C A C G T A C G T A C G T A A C G T A G T C A C G T A G T C A G T C A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

Gfi1b/MA0483.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AAAAATCTCC---
--AAATCACAGCA
 C G T A G T C A C G T A C G T A C G T A A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

PBX2/MA1113.2/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AAAAATCTCC
GTCATAAATCATT
 A C G T A C G T A C G T C G T A G T C A C G T A C G T A C G T A A C G T A G T C A C G T A G T C A G T C
T C A G G A C T G T A C C T G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G A C T G C A T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AAAAATCTCC
GGCCATAAATCA--
 A C G T A C G T A C G T A C G T C G T A G T C A C G T A C G T A C G T A A C G T A G T C A C G T A G T C A G T C
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AAAAATCTCC---
NNNCTGATATCTCNNNN
 A C G T A C G T A C G T A C G T C G T A G T C A C G T A C G T A C G T A A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C