Information for 1-CTAACAGGCT (Motif 1)

T G A C G C A T C G T A C G T A T A G C C G T A C A T G C A T G A T G C A G C T
Reverse Opposite:
C T G A T A C G G T A C G T A C C G A T A T C G G C A T G C A T C G T A A C T G
p-value:1e-9
log p-value:-2.075e+01
Information Content per bp:1.630
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif18.75%
Number of Background Sequences with motif426.5
Percentage of Background Sequences with motif0.97%
Average Position of motif in Targets467.2 +/- 338.0bp
Average Position of motif in Background445.3 +/- 345.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL2/MA1105.2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTAACAGGCT--
AAAACAGGTTTT
 T G A C G C A T C G T A C G T A T A G C C G T A C A T G C A T G A T G C A G C T A C G T A C G T
T G C A T C G A C T G A C T G A T A G C G C T A C T A G T A C G G A C T G A C T A G C T C A G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CTAACAGGCT--
----TWGTCTGV
 T G A C G C A T C G T A C G T A T A G C C G T A C A T G C A T G A T G C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CTAACAGGCT-
------NGCTN
 T G A C G C A T C G T A C G T A T A G C C G T A C A T G C A T G A T G C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CTAACAGGCT
TTCAAAWTAAAAGTC-
 A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C A T C G T A C G T A T A G C C G T A C A T G C A T G A T G C A G C T
C A G T G A C T A G T C G C T A C T G A G T C A C G T A A G C T G T C A C T G A C T G A C T G A A C T G A G C T G A T C A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTAACAGGCT
-YAACBGCC-
 T G A C G C A T C G T A C G T A T A G C C G T A C A T G C A T G A T G C A G C T
A C G T A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTAACAGGCT--
AATNTTAAGTGGNTNN
 A C G T A C G T A C G T A C G T T G A C G C A T C G T A C G T A T A G C C G T A C A T G C A T G A T G C A G C T A C G T A C G T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

Nkx3-2/MA0122.3/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTAACAGGCT--
NTTAAGTGGTTNN
 A C G T T G A C G C A T C G T A C G T A T A G C C G T A C A T G C A T G A T G C A G C T A C G T A C G T
C G A T G C A T C G A T C T G A C G T A C A T G C G A T C T A G A C T G G C A T G C A T G C T A G C A T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTAACAGGCT---
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C G T A C G T T G A C G C A T C G T A C G T A T A G C C G T A C A T G C A T G A T G C A G C T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

SIX1/MA1118.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTAACAGGCT--
-TATCAGGTTAC
 T G A C G C A T C G T A C G T A T A G C C G T A C A T G C A T G A T G C A G C T A C G T A C G T
A C G T C A G T T G C A G C A T G A T C C G T A C A T G C T A G G C A T C G A T G C T A G T A C

OVOL2/MA1545.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CTAACAGGCT
NNNNTAACGGTNN
 A C G T A C G T A C G T T G A C G C A T C G T A C G T A T A G C C G T A C A T G C A T G A T G C A G C T
T A G C C T G A G T A C T C G A A G C T G T C A C T G A A G T C A T C G A T C G C G A T G C T A G A T C