Information for 4-AAAGGAGGTA (Motif 4)

G T C A C G T A C G T A A C T G A C T G C G T A C T A G A T C G C A G T C G T A
Reverse Opposite:
A C G T G T C A T A G C A G T C A C G T G T A C A G T C A C G T A C G T A C G T
p-value:1e-6
log p-value:-1.568e+01
Information Content per bp:1.859
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif20.41%
Number of Background Sequences with motif1009.9
Percentage of Background Sequences with motif2.30%
Average Position of motif in Targets374.8 +/- 248.9bp
Average Position of motif in Background520.8 +/- 360.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN1/MA1585.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAAGGAGGTA
ATAGTAGGTG
 G T C A C G T A C G T A A C T G A C T G C G T A C T A G A T C G C A G T C G T A
T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G

ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AAAGGAGGTA-
TAYAAAAGBWGGCAG
 A C G T A C G T A C G T A C G T G T C A C G T A C G T A A C T G A C T G C G T A C T A G A T C G C A G T C G T A A C G T
G A C T C G T A G A T C C G T A C G T A C T G A C G T A A C T G A C T G G C A T C A T G C T A G A G T C C T G A T C A G

PB0137.1_Irf3_2/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AAAGGAGGTA
GGAGAAAGGTGCGA
 A C G T A C G T A C G T A C G T G T C A C G T A C G T A A C T G A C T G C G T A C T A G A T C G C A G T C G T A
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AAAGGAGGTA
AACAGGAAGT-
 A C G T G T C A C G T A C G T A A C T G A C T G C G T A C T A G A T C G C A G T C G T A
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T

ETV4/MA0764.2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAAGGAGGTA
ACAGGAAGTG
 G T C A C G T A C G T A A C T G A C T G C G T A C T A G A T C G C A G T C G T A
T C G A T A G C G T C A A T C G A C T G C G T A G T C A A C T G A G C T T C A G

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAAGGAGGTA
ANCAGGAAGT-
 A C G T G T C A C G T A C G T A A C T G A C T G C G T A C T A G A T C G C A G T C G T A
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T

ETV1/MA0761.2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAAGGAGGTA--
AAACAGGAAGTGAA
 A C G T A C G T G T C A C G T A C G T A A C T G A C T G C G T A C T A G A T C G C A G T C G T A A C G T A C G T
C T G A T C G A T C G A T A G C T G C A A C T G C A T G T G C A G C T A T C A G G A C T C T A G T C G A T C G A

EHF/MA0598.3/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AAAGGAGGTA--
NNAACAGGAAGTGNN
 A C G T A C G T A C G T G T C A C G T A C G T A A C T G A C T G C G T A C T A G A T C G C A G T C G T A A C G T A C G T
T C A G C T G A C G T A T G C A T A G C T G C A C A T G C T A G T G C A C G T A T C A G G A C T C T A G T C G A T A C G

GABPA/MA0062.3/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AAAGGAGGTA--
NNACAGGAAGTGNN
 A C G T A C G T G T C A C G T A C G T A A C T G A C T G C G T A C T A G A T C G C A G T C G T A A C G T A C G T
C T G A T C G A T C G A T A G C G T C A C A T G C T A G T G C A C G T A T C A G G A C T C T A G T C A G T C A G

ELF3/MA0640.2/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAAGGAGGTA---
ANCAGGAAGTGGNN
 A C G T G T C A C G T A C G T A A C T G A C T G C G T A C T A G A T C G C A G T C G T A A C G T A C G T A C G T
C G T A T A G C T A G C T G C A T C A G C T A G T G C A C T G A T C A G G C A T C T A G T C A G T C G A C T G A