Information for 5-CGCA (Motif 11)

A G T C A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C T G
p-value:1e0
log p-value:-4.294e-01
Information Content per bp:1.530
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif73.47%
Number of Background Sequences with motif32803.6
Percentage of Background Sequences with motif74.71%
Average Position of motif in Targets593.4 +/- 289.0bp
Average Position of motif in Background629.8 +/- 338.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)5.69
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB14/MA1650.1/Jaspar

Match Rank:1
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----CGCA---
CCCCGCGCACCC
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C C G T A A C G T A C G T A C G T
T A G C A T G C T A G C A T G C T A C G A T G C T A C G T A G C T G C A A T G C T A G C A T G C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CGCA
CACGCA
 A C G T A C G T A G T C A C T G A G T C C G T A
A G T C C G T A G T A C C T A G G T A C C T G A

RUNX2/MA0511.2/Jaspar

Match Rank:3
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CGCA-
AAACCGCAA
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C C G T A A C G T
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:4
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----CGCA-
TBGCACGCAA
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C C G T A A C G T
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

ZFP57/MA1583.1/Jaspar

Match Rank:5
Score:0.70
Offset:-7
Orientation:forward strand
Alignment:-------CGCA--
GCATTGCCGCAGT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C C G T A A C G T A C G T
A T C G A T G C T C G A A C G T A C G T A T C G G A T C T A G C C T A G A T G C T C G A T A C G A G C T

PB0024.1_Gcm1_1/Jaspar

Match Rank:6
Score:0.69
Offset:-7
Orientation:forward strand
Alignment:-------CGCA-----
TCGTACCCGCATCATT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

CEBPG/MA0838.1/Jaspar

Match Rank:7
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CGCA--
ATTGCGCAAT
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C C G T A A C G T A C G T
T C G A C A G T C A G T C T A G G A T C C T A G G A T C C T G A C G T A A G C T

GCM2/MA0767.1/Jaspar

Match Rank:8
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----CGCA--
TACCCGCATN
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C C G T A A C G T A C G T
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer

Match Rank:9
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CGCA---
TGCSGCANTN
 A C G T A C G T A C G T A G T C A C T G A G T C C G T A A C G T A C G T A C G T
A G C T T C A G G A T C A T C G T C A G A T G C T G C A G T C A C G A T C T A G

PB0199.1_Zfp161_2/Jaspar

Match Rank:10
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CGCA------
GCCGCGCAGTGCGT
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T