Information for 2-TATA (Motif 9)

A C G T C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T C G T A
p-value:1e0
log p-value:-8.844e-01
Information Content per bp:1.530
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif65.31%
Number of Background Sequences with motif28571.2
Percentage of Background Sequences with motif62.68%
Average Position of motif in Targets412.5 +/- 282.2bp
Average Position of motif in Background470.1 +/- 335.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)3.53
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBP/MA0108.2/Jaspar

Match Rank:1
Score:0.77
Offset:-10
Orientation:reverse strand
Alignment:----------TATA-
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

POL012.1_TATA-Box/Jaspar

Match Rank:2
Score:0.77
Offset:-10
Orientation:reverse strand
Alignment:----------TATA-
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

PB0163.1_Six6_2/Jaspar

Match Rank:3
Score:0.76
Offset:-7
Orientation:reverse strand
Alignment:-------TATA------
ANNNGGATATATCCNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

PB0080.1_Tbp_1/Jaspar

Match Rank:4
Score:0.73
Offset:-6
Orientation:forward strand
Alignment:------TATA------
TCTTTATATATAAATA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

PB0174.1_Sox30_2/Jaspar

Match Rank:5
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------TATA------
NCGTATTATAATCNTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

PB0079.1_Sry_1/Jaspar

Match Rank:6
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------TATA------
TATAATTATAATATTC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PB0198.1_Zfp128_2/Jaspar

Match Rank:7
Score:0.66
Offset:-8
Orientation:reverse strand
Alignment:--------TATA--
NNTATANATATACN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T
A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A

PB0069.1_Sox21_1/Jaspar

Match Rank:8
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------TATA------
NNTAATTATAATNANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

SRF/MA0083.3/Jaspar

Match Rank:9
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------TATA------
TGNCCATATATGGTCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C A T A C T G G T C A G A T C A T G C C G T A C G A T T G C A A G C T G C T A G C A T T C A G A T C G C A G T T G A C C G T A

PB0064.1_Sox14_1/Jaspar

Match Rank:10
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------TATA------
GCTAATTATAATTATC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C